Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4851
Experiment: Dictyostellum sp.mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-1 |
|---|---|---|---|---|---|
| remove | |||||
| 149,334 | + | GFF4850 | 0.39 | -0.2 | |
| 149,561 | - | GFF4850 | 0.55 | +0.8 | |
| 149,606 | + | GFF4850 | 0.58 | -0.1 | |
| 149,722 | + | GFF4850 | 0.67 | -2.2 | |
| 149,722 | + | GFF4850 | 0.67 | +0.5 | |
| 149,854 | + | GFF4850 | 0.77 | -0.6 | |
| 149,915 | - | GFF4850 | 0.81 | -0.2 | |
| 150,143 | + | +0.1 | |||
| 150,143 | + | -0.1 | |||
| 150,143 | + | -0.1 | |||
| 150,143 | + | -0.2 | |||
| 150,245 | - | GFF4851 | 0.63 | +0.4 | |
| 150,462 | + | +0.2 | |||
| 150,463 | - | +0.5 | |||
| 150,517 | - | -0.1 | |||
| 150,522 | - | -1.0 | |||
| 150,543 | + | -0.1 | |||
| 150,760 | + | +0.1 | |||
| 150,761 | - | +0.9 | |||
| 151,039 | + | GFF4852 | 0.23 | +0.8 | |
| 151,050 | - | GFF4852 | 0.24 | +0.9 | |
| 151,100 | - | GFF4852 | 0.28 | +0.4 | |
| 151,235 | - | GFF4852 | 0.39 | +0.8 | |
| 151,235 | - | GFF4852 | 0.39 | -0.1 | |
| 151,281 | - | GFF4852 | 0.42 | +0.1 |
Or see this region's nucleotide sequence