Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4586

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
373,704	-		GFF4585	0.21	-1.0
373,892	-		GFF4585	0.37	-1.1
373,892	-		GFF4585	0.37	-0.1
373,948	+		GFF4585	0.42	+0.0
374,319	-		GFF4585	0.74	-0.0
374,337	-		GFF4585	0.76	-0.7
374,339	+		GFF4585	0.76	-0.3
374,340	-		GFF4585	0.76	-0.7
374,340	-		GFF4585	0.76	-0.5
374,340	-		GFF4585	0.76	-0.7
374,406	-		GFF4585	0.82	-1.1
374,612	-				-1.0
374,980	+		GFF4586	0.38	-0.8
374,981	-		GFF4586	0.38	+0.7
375,266	-		GFF4586	0.74	-2.6
375,403	+				+0.3
375,404	-				-0.1
375,404	-				-0.5
375,407	-				-0.5
375,524	+				-0.3
375,657	+				-0.1
375,735	+				+0.8
375,798	+				-0.1
375,808	-				+0.0
375,912	+				-0.1
375,913	-				-0.2
375,913	-				-0.0
375,997	-				+0.5
376,110	+		GFF4587	0.16	+0.2
376,199	+		GFF4587	0.20	-0.5
376,199	+		GFF4587	0.20	-0.1
376,266	-		GFF4587	0.24	+0.2
376,326	+		GFF4587	0.27	-0.9
376,377	-		GFF4587	0.29	-1.0
376,434	-		GFF4587	0.32	-0.4
376,434	-		GFF4587	0.32	-0.0
376,460	-		GFF4587	0.34	+0.4