Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4233
Experiment: Dictyostellum sp.mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-1 |
---|---|---|---|---|---|
remove | |||||
13,622 | - | -0.0 | |||
13,664 | + | -0.3 | |||
13,720 | + | +0.1 | |||
13,756 | - | +0.2 | |||
13,767 | + | +0.4 | |||
13,768 | - | +0.4 | |||
13,811 | + | -0.2 | |||
13,823 | - | +0.2 | |||
13,985 | - | GFF4232 | 0.25 | -0.2 | |
14,017 | - | GFF4232 | 0.30 | +0.0 | |
14,616 | + | +0.2 | |||
14,617 | - | +0.2 | |||
14,697 | + | GFF4233 | 0.15 | -0.6 | |
15,741 | + | +0.2 | |||
16,066 | - | GFF4234 | 0.34 | -0.3 |
Or see this region's nucleotide sequence