Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3881

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
156,898	+		GFF3880	0.32	-2.7
156,899	-		GFF3880	0.32	+0.1
156,925	+		GFF3880	0.34	-0.2
157,255	+		GFF3880	0.58	+0.1
157,256	-		GFF3880	0.58	+0.2
157,462	+		GFF3880	0.73	-0.2
157,961	+				-0.1
158,022	+				+0.5
158,022	+				-0.0
158,022	+				-0.4
158,023	-				-0.2
158,023	-				+0.5
158,233	-		GFF3881	0.25	+1.1
158,311	-		GFF3881	0.30	-0.1
158,313	-		GFF3881	0.31	+0.7
158,671	-		GFF3881	0.56	+0.6
158,894	+		GFF3881	0.72	-1.3
159,079	-		GFF3881	0.85	+0.2
159,447	-				+0.2
159,839	+		GFF3882	0.30	+1.3
160,074	-		GFF3882	0.46	-0.3
160,084	-		GFF3882	0.46	-0.1
160,150	-		GFF3882	0.51	+0.2
160,152	-		GFF3882	0.51	+0.5
160,162	-		GFF3882	0.52	-0.2
160,194	-		GFF3882	0.54	-1.2
160,273	-		GFF3882	0.59	-0.4
160,273	-		GFF3882	0.59	+0.2
160,275	-		GFF3882	0.59	+0.1