Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3663

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
11,302	-		GFF3662	0.57	-0.1
11,422	-		GFF3662	0.64	+0.1
11,528	+		GFF3662	0.70	+0.0
11,639	-		GFF3662	0.76	-0.1
11,639	-		GFF3662	0.76	+0.2
11,811	-		GFF3662	0.86	+0.3
11,896	+				+1.1
11,919	+				+0.1
11,919	+				-0.3
11,919	+				+0.4
12,046	-				+0.3
12,106	+				+0.2
12,106	+				+0.3
12,120	+				+0.0
12,152	-				+0.4
12,271	+		GFF3663	0.11	+0.5
12,271	+		GFF3663	0.11	+0.5
12,279	-		GFF3663	0.12	+0.0
12,435	+		GFF3663	0.34	-0.9
12,436	-		GFF3663	0.34	+0.7
12,829	-				+0.4
13,021	+				+0.5
13,131	+				-1.1
13,507	+		GFF3664	0.40	-1.7
13,508	-		GFF3664	0.40	-1.3
13,516	+		GFF3664	0.40	-1.3
13,652	-		GFF3664	0.53	+0.4
13,718	+		GFF3664	0.59	-1.2
13,757	-		GFF3664	0.63	-0.5
13,757	-		GFF3664	0.63	-1.1