Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3601
Experiment: Dictyostellum sp.mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-1 |
---|---|---|---|---|---|
remove | |||||
352,990 | + | GFF3599 | 0.87 | -0.4 | |
353,467 | + | GFF3600 | 0.67 | -0.2 | |
353,937 | + | GFF3601 | 0.44 | +0.1 | |
354,003 | + | GFF3601 | 0.53 | -0.1 | |
354,053 | - | GFF3601 | 0.61 | -0.3 | |
354,277 | - | +0.0 | |||
354,387 | - | +0.1 | |||
354,403 | + | -0.1 | |||
354,644 | + | GFF3602 | 0.34 | -0.0 | |
354,792 | - | GFF3602 | 0.49 | -0.7 | |
354,850 | + | GFF3602 | 0.55 | +0.6 | |
354,906 | - | GFF3602 | 0.60 | +0.4 | |
354,986 | - | GFF3602 | 0.68 | +0.2 | |
355,203 | - | +0.4 |
Or see this region's nucleotide sequence