Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3528
Experiment: Dictyostellum sp.mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-1 |
---|---|---|---|---|---|
remove | |||||
281,272 | - | GFF3528 | 0.50 | -1.1 | |
281,331 | + | GFF3528 | 0.70 | -2.6 | |
281,337 | + | GFF3528 | 0.72 | -2.3 | |
281,452 | + | +0.4 | |||
281,452 | + | +1.0 | |||
281,464 | + | +0.3 | |||
281,465 | - | +0.9 | |||
281,484 | - | +0.4 | |||
281,504 | + | +0.4 | |||
281,504 | + | +0.4 | |||
281,505 | - | +0.5 | |||
281,715 | + | +0.3 | |||
282,007 | + | GFF3529 | 0.39 | +1.0 | |
282,086 | - | GFF3529 | 0.47 | +0.2 | |
282,152 | + | GFF3529 | 0.54 | +0.3 | |
282,421 | - | GFF3529 | 0.81 | +0.2 |
Or see this region's nucleotide sequence