Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3366

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
133,809	-				+0.3
134,003	-				-0.2
134,003	-				-0.0
134,025	-				-0.2
134,025	-				-0.1
134,127	-				+0.0
134,128	+				-0.0
134,129	-				+0.1
134,134	+				-0.1
134,355	-		GFF3366	0.18	+0.3
134,486	-		GFF3366	0.32	-0.3
134,486	-		GFF3366	0.32	-0.7
134,746	+		GFF3366	0.59	-0.2
134,919	+		GFF3366	0.77	-0.6
134,923	+		GFF3366	0.77	-0.5
134,923	+		GFF3366	0.77	-0.5
134,924	-		GFF3366	0.77	-0.2
134,924	-		GFF3366	0.77	-0.5
134,931	-		GFF3366	0.78	-0.8
135,013	+		GFF3366	0.86	+0.2
135,141	-				+0.9
135,162	-				-0.6
135,162	-				-0.1
135,188	-				-0.6
135,309	+				+0.4
135,309	+				-0.2
135,328	+				-0.3
135,429	+		GFF3367	0.20	+0.4
135,490	+		GFF3367	0.28	+1.4
135,502	+		GFF3367	0.29	+0.1
135,503	-		GFF3367	0.29	+0.2
135,503	-		GFF3367	0.29	+0.7
135,512	+		GFF3367	0.30	+0.3
135,512	+		GFF3367	0.30	+0.1
135,512	+		GFF3367	0.30	-0.2
135,568	-		GFF3367	0.38	+0.0
135,707	+		GFF3367	0.56	+0.2
136,040	-				-0.4
136,138	+				+0.3