Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3270

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
41,380	+		GFF3268	0.76	-0.8
41,546	+		GFF3268	0.86	+0.9
41,553	+		GFF3268	0.86	-0.1
41,554	-		GFF3268	0.86	+0.6
41,560	+		GFF3268	0.87	-0.5
41,635	+				-0.2
41,783	-				-0.1
41,944	-				+0.2
41,944	-				-0.1
42,064	-				-0.2
42,275	+				-0.1
42,294	+				+0.1
42,336	-		GFF3270	0.11	-1.0
42,336	-		GFF3270	0.11	-1.0
42,340	-		GFF3270	0.13	-0.2
42,705	-		GFF3271	0.13	+0.2
42,764	-		GFF3271	0.17	-0.0
42,919	+		GFF3271	0.27	-0.1
42,920	-		GFF3271	0.27	+0.4
43,381	+		GFF3271	0.56	+0.0
43,381	+		GFF3271	0.56	+0.3
43,381	+		GFF3271	0.56	+0.3
43,439	-		GFF3271	0.60	-0.6
43,441	-		GFF3271	0.60	+0.4