Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3234
Experiment: Dictyostellum sp.mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-1 |
---|---|---|---|---|---|
remove | |||||
4,500 | - | -1.0 | |||
5,581 | - | -2.5 | |||
5,904 | + | -1.2 | |||
5,963 | + | +0.1 | |||
5,983 | - | -0.2 | |||
6,191 | + | -0.8 | |||
6,196 | - | -2.3 | |||
6,226 | + | -0.0 | |||
6,227 | - | -0.3 | |||
6,299 | + | GFF3235 | 0.11 | -0.5 | |
6,417 | - | GFF3235 | 0.16 | -0.1 | |
6,429 | + | GFF3235 | 0.16 | -0.2 |
Or see this region's nucleotide sequence