Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3112

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
120,526	+		GFF3111	0.65	-0.1
120,527	-		GFF3111	0.65	+0.5
120,546	+		GFF3111	0.66	-0.3
120,547	-		GFF3111	0.66	-0.1
120,547	-		GFF3111	0.66	+0.1
120,547	-		GFF3111	0.66	-0.2
120,767	-		GFF3111	0.80	+0.1
120,938	+				+0.3
120,939	-				-0.4
120,974	-				-0.0
121,014	+				-0.7
121,015	-				+0.4
121,017	-				+0.0
121,078	+				-0.1
121,180	-				+0.5
121,182	-				-0.2
121,182	-				-0.1
121,183	+				+0.1
121,183	+				-1.3
121,184	-				+0.4
121,291	-				+0.0
121,497	-		GFF3112	0.18	-0.1
121,692	-		GFF3112	0.57	-0.9
121,876	-				+0.6
121,880	+				-0.6
121,881	-				-0.3
121,938	-				+0.5
121,939	+				+0.2
121,939	+				-0.7
121,984	-				+0.1
122,169	+				+0.3
122,184	+				+1.2
122,345	+		GFF3113	0.32	-0.2
122,346	-		GFF3113	0.32	+0.1
122,476	-		GFF3113	0.58	+0.0
122,476	-		GFF3113	0.58	+1.5