Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2961

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
45,128	-		GFF2960	0.45	-0.3
45,173	-		GFF2960	0.48	-1.0
45,300	+		GFF2960	0.58	-1.2
45,549	+		GFF2960	0.78	-0.1
45,762	-				+0.3
45,762	-				-0.8
46,049	-		GFF2961	0.28	-1.1
46,163	+		GFF2961	0.53	+0.3
46,166	+		GFF2961	0.53	+0.2
46,182	+		GFF2961	0.57	+0.0
46,239	-		GFF2961	0.69	+0.5
46,368	-				+0.0
46,384	+				+0.3
46,384	+				+0.0
46,384	+				-1.2
46,384	+				-0.0
46,385	-				-1.6
46,385	-				-2.5
46,421	-				+0.1
46,467	-				+0.5
46,762	+		GFF2962	0.43	+0.2
46,882	+		GFF2962	0.57	-0.1
46,916	+		GFF2962	0.61	-0.0
47,074	+		GFF2962	0.79	+0.7
47,224	-				+0.3
47,250	+				+0.6
47,251	-				-0.0
47,251	-				+0.1
47,382	-		GFF2963	0.19	+0.2
47,382	-		GFF2963	0.19	+0.1
47,383	+		GFF2963	0.19	-1.6