Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2169

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
16,428	+				-0.3
16,429	-				+0.1
16,452	-				+0.3
16,456	-				+0.1
16,467	+				-0.9
16,489	-				-0.2
16,505	-				-0.5
16,511	+				+0.5
16,634	+				-0.2
16,708	+		GFF2168	0.11	+0.1
16,731	+		GFF2168	0.15	+0.1
16,732	-		GFF2168	0.15	+0.1
16,782	+		GFF2168	0.23	-0.6
16,783	-		GFF2168	0.23	+0.4
17,004	+		GFF2168	0.58	-0.1
17,004	+		GFF2168	0.58	-0.5
17,042	+		GFF2168	0.64	+0.2
17,234	-				-0.2
17,234	-				+0.9
17,269	-				-0.7
17,424	-		GFF2169	0.14	-0.5
17,429	-		GFF2169	0.15	-0.5
17,429	-		GFF2169	0.15	-0.9
17,451	-		GFF2169	0.17	-0.7
17,505	-		GFF2169	0.22	-0.4
17,587	-		GFF2169	0.30	-0.7
17,587	-		GFF2169	0.30	-0.2
17,627	-		GFF2169	0.34	-0.5
17,630	+		GFF2169	0.34	-0.3
17,630	+		GFF2169	0.34	-1.3
17,631	-		GFF2169	0.34	-0.6
17,711	+		GFF2169	0.42	-0.9
17,866	+		GFF2169	0.57	+0.1
17,867	-		GFF2169	0.57	-1.1
17,867	-		GFF2169	0.57	-1.4
17,989	+		GFF2169	0.69	-2.5
18,111	+		GFF2169	0.81	-0.6
18,226	-				+0.4
18,226	-				-0.2
18,291	-				-0.3
18,639	+				+0.0
18,640	-				+0.3
18,799	+		GFF2171	0.12	-0.4
18,828	+		GFF2171	0.16	-0.6
19,029	-		GFF2171	0.48	-1.0
19,061	+		GFF2171	0.54	+0.1
19,177	+		GFF2171	0.72	-0.6
19,186	+		GFF2171	0.74	+0.1
19,260	-		GFF2171	0.85	+0.7
19,299	-				+0.1