Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2162

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
7,926	-		GFF2161	0.59	-0.9
8,397	+		GFF2161	0.88	-0.9
8,441	+				-2.1
8,739	+				-0.2
8,739	+				+0.4
8,740	-				-0.1
8,740	-				+0.3
8,813	+				+0.3
9,267	-				+0.3
9,288	+				-0.1
9,444	-				-0.2
9,485	+		GFF2163	0.31	-0.8
9,486	-		GFF2163	0.31	+0.6
9,586	-		GFF2163	0.83	-0.1
9,648	-				-0.0
9,650	-				-0.1
9,671	-				-0.5
9,671	-				+0.4
9,674	+				+0.2
9,674	+				-0.1
9,675	-				+0.3
9,684	+				-0.0
9,722	+				+0.8
9,726	+				+0.5
9,882	+				-0.1
9,984	-				-0.9