Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2097

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
5,958	+		GFF2096	0.68	+0.5
6,172	+		GFF2096	0.76	-1.0
6,173	-		GFF2096	0.76	+0.2
6,185	+		GFF2096	0.77	+0.5
6,453	+		GFF2096	0.87	-0.1
6,454	-		GFF2096	0.87	-1.1
6,454	-		GFF2096	0.87	-0.0
6,764	+				+0.2
6,979	-		GFF2097	0.18	-0.1
7,094	+		GFF2097	0.35	+0.3
7,106	+		GFF2097	0.36	+1.6
7,106	+		GFF2097	0.36	+0.2
7,228	+		GFF2097	0.54	+0.5
7,229	-		GFF2097	0.54	-0.8
7,406	+		GFF2097	0.80	+0.2
7,530	-				+0.2
7,670	+		GFF2098	0.14	-0.0
7,826	+		GFF2098	0.51	+0.1
8,030	+				-0.3
8,030	+				+0.5
8,031	-				+0.1
8,031	-				-0.2
8,031	-				-0.2
8,279	+				+0.4
8,279	+				-0.2
8,279	+				-0.1
8,420	-		GFF2099	0.18	-1.3
8,420	-		GFF2099	0.18	+0.1
8,515	+		GFF2099	0.27	+0.1
8,515	+		GFF2099	0.27	+0.2