Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2077

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
39,797	-		GFF2076	0.34	-0.5
40,076	+		GFF2076	0.58	-0.6
40,143	-		GFF2076	0.63	+0.2
40,148	-		GFF2076	0.64	+0.1
40,148	-		GFF2076	0.64	+0.2
40,431	-		GFF2076	0.88	+0.2
40,562	+				+0.1
40,562	+				+0.6
40,563	-				+0.2
40,628	+				+0.3
40,889	+		GFF2077	0.38	-0.8
40,890	-		GFF2077	0.39	-0.5
40,921	+		GFF2077	0.42	-1.1
40,922	-		GFF2077	0.42	+0.2
40,922	-		GFF2077	0.42	-0.1
40,922	-		GFF2077	0.42	-2.5
40,922	-		GFF2077	0.42	+0.1
41,034	+		GFF2077	0.56	+0.7
41,508	+				+0.1
41,508	+				-0.1
42,139	-		GFF2078	0.51	+0.2
42,139	-		GFF2078	0.51	+0.5