Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF119
Experiment: Dictyostellum sp.mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-1 |
---|---|---|---|---|---|
remove | |||||
105,499 | - | GFF117 | 0.31 | +0.3 | |
105,511 | + | GFF117 | 0.32 | -1.2 | |
105,512 | - | GFF117 | 0.32 | +0.0 | |
105,625 | + | GFF117 | 0.46 | +0.1 | |
105,629 | - | GFF117 | 0.47 | -0.9 | |
105,650 | - | GFF117 | 0.50 | -0.2 | |
105,650 | - | GFF117 | 0.50 | +0.1 | |
105,655 | - | GFF117 | 0.50 | +0.1 | |
105,672 | - | GFF117 | 0.52 | -0.1 | |
105,672 | - | GFF117 | 0.52 | +0.3 | |
105,693 | - | GFF117 | 0.55 | -0.3 | |
105,699 | + | GFF117 | 0.56 | -0.0 | |
105,759 | - | GFF117 | 0.63 | +0.1 | |
105,857 | - | GFF117 | 0.76 | +0.2 | |
105,955 | + | GFF117 | 0.88 | -0.1 | |
105,956 | - | GFF117 | 0.88 | +0.4 | |
105,960 | - | GFF117 | 0.89 | +0.0 | |
106,003 | + | +0.3 | |||
106,003 | + | +0.1 | |||
106,437 | + | +0.0 | |||
106,495 | + | GFF119 | 0.35 | -0.3 | |
106,660 | + | -0.6 | |||
106,701 | - | -3.4 |
Or see this region's nucleotide sequence