Strain Fitness in Escherichia coli BW25113 around b4159
Experiment: LB Aerobic with Benzethonium chloride 0.000015625 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB Aerobic with Benzethonium chloride 0.000015625 mM |
---|---|---|---|---|---|
remove | |||||
4,383,123 | + | yjeM | b4156 | 0.84 | +0.9 |
4,383,123 | + | yjeM | b4156 | 0.84 | -1.0 |
4,383,166 | + | yjeM | b4156 | 0.87 | -1.0 |
4,383,219 | + | -0.1 | |||
4,383,226 | + | +0.7 | |||
4,383,330 | - | +2.7 | |||
4,383,377 | + | -0.3 | |||
4,383,377 | + | -1.2 | |||
4,383,384 | - | -0.7 | |||
4,383,403 | - | +0.3 | |||
4,383,403 | - | +0.9 | |||
4,383,403 | - | -0.6 | |||
4,383,423 | + | -0.7 | |||
4,383,502 | + | yjeN | b4157 | 0.27 | +1.1 |
4,383,502 | + | yjeN | b4157 | 0.27 | -0.2 |
4,383,503 | - | yjeN | b4157 | 0.28 | -0.6 |
4,383,567 | - | yjeN | b4157 | 0.48 | -0.9 |
4,383,570 | + | yjeN | b4157 | 0.49 | -1.0 |
4,383,582 | + | yjeN | b4157 | 0.53 | +0.2 |
4,383,622 | + | yjeN | b4157 | 0.65 | -0.6 |
4,383,635 | - | yjeN | b4157 | 0.70 | +0.5 |
4,383,727 | - | -0.3 | |||
4,383,731 | - | -0.7 | |||
4,383,731 | - | +0.4 | |||
4,383,748 | - | -1.1 | |||
4,383,853 | + | yjeO | b4158 | 0.40 | +0.4 |
4,383,853 | + | yjeO | b4158 | 0.40 | -1.7 |
4,383,858 | + | yjeO | b4158 | 0.42 | -0.6 |
4,383,913 | + | yjeO | b4158 | 0.59 | +0.1 |
4,384,045 | + | +0.6 | |||
4,384,140 | - | -4.8 | |||
4,384,151 | + | -4.7 | |||
4,384,197 | - | -2.6 | |||
4,384,197 | - | -2.1 | |||
4,384,221 | + | -0.7 | |||
4,384,251 | - | -2.7 | |||
4,384,251 | - | -2.3 | |||
4,384,257 | - | -2.6 | |||
4,384,257 | - | -2.4 | |||
4,384,268 | - | -2.6 | |||
4,384,339 | - | -3.8 | |||
4,384,364 | - | -3.6 | |||
4,384,403 | + | yjeP | b4159 | 0.10 | -5.2 |
4,384,403 | + | yjeP | b4159 | 0.10 | -5.2 |
4,384,412 | + | yjeP | b4159 | 0.10 | -1.4 |
4,384,412 | + | yjeP | b4159 | 0.10 | -3.1 |
4,384,412 | + | yjeP | b4159 | 0.10 | -3.1 |
4,384,412 | + | yjeP | b4159 | 0.10 | -3.9 |
4,384,412 | + | yjeP | b4159 | 0.10 | -3.8 |
4,384,426 | - | yjeP | b4159 | 0.11 | -2.7 |
4,384,434 | + | yjeP | b4159 | 0.11 | -2.1 |
4,384,434 | + | yjeP | b4159 | 0.11 | -0.7 |
4,384,513 | + | yjeP | b4159 | 0.13 | -4.0 |
4,384,553 | + | yjeP | b4159 | 0.15 | -2.8 |
4,384,553 | + | yjeP | b4159 | 0.15 | -1.4 |
4,384,609 | + | yjeP | b4159 | 0.16 | -2.7 |
4,384,609 | + | yjeP | b4159 | 0.16 | -2.1 |
4,384,651 | + | yjeP | b4159 | 0.17 | -2.9 |
4,384,671 | - | yjeP | b4159 | 0.18 | -4.2 |
4,384,689 | - | yjeP | b4159 | 0.19 | -2.8 |
4,384,710 | + | yjeP | b4159 | 0.19 | -4.1 |
4,384,714 | - | yjeP | b4159 | 0.19 | -1.7 |
4,384,714 | - | yjeP | b4159 | 0.19 | -3.0 |
4,384,718 | - | yjeP | b4159 | 0.19 | -5.0 |
4,384,718 | - | yjeP | b4159 | 0.19 | -2.1 |
4,384,773 | + | yjeP | b4159 | 0.21 | -1.4 |
4,384,773 | + | yjeP | b4159 | 0.21 | -0.9 |
4,384,779 | + | yjeP | b4159 | 0.21 | -5.5 |
4,384,781 | - | yjeP | b4159 | 0.21 | -2.7 |
4,384,793 | - | yjeP | b4159 | 0.22 | -3.6 |
4,384,793 | - | yjeP | b4159 | 0.22 | -3.3 |
4,384,826 | + | yjeP | b4159 | 0.23 | -3.8 |
4,384,832 | - | yjeP | b4159 | 0.23 | -3.3 |
4,384,855 | + | yjeP | b4159 | 0.24 | -3.5 |
4,384,886 | + | yjeP | b4159 | 0.25 | -3.4 |
4,384,913 | - | yjeP | b4159 | 0.25 | -2.8 |
4,384,913 | - | yjeP | b4159 | 0.25 | -2.7 |
4,384,928 | + | yjeP | b4159 | 0.26 | -2.9 |
4,384,928 | + | yjeP | b4159 | 0.26 | -1.9 |
4,384,933 | + | yjeP | b4159 | 0.26 | -1.4 |
4,384,936 | - | yjeP | b4159 | 0.26 | -1.4 |
4,384,936 | - | yjeP | b4159 | 0.26 | -2.9 |
4,384,936 | - | yjeP | b4159 | 0.26 | -1.7 |
4,385,104 | + | yjeP | b4159 | 0.31 | -4.1 |
4,385,126 | + | yjeP | b4159 | 0.32 | -4.0 |
4,385,181 | - | yjeP | b4159 | 0.33 | -5.0 |
4,385,246 | + | yjeP | b4159 | 0.35 | -2.9 |
4,385,261 | - | yjeP | b4159 | 0.36 | -0.9 |
4,385,261 | - | yjeP | b4159 | 0.36 | -2.4 |
4,385,372 | - | yjeP | b4159 | 0.39 | -3.7 |
4,385,391 | - | yjeP | b4159 | 0.40 | -4.6 |
4,385,458 | + | yjeP | b4159 | 0.42 | -3.6 |
4,385,478 | + | yjeP | b4159 | 0.42 | -2.3 |
4,385,493 | + | yjeP | b4159 | 0.43 | -1.6 |
4,385,531 | + | yjeP | b4159 | 0.44 | -4.8 |
4,385,531 | + | yjeP | b4159 | 0.44 | -3.0 |
4,385,546 | + | yjeP | b4159 | 0.44 | -3.9 |
4,385,572 | + | yjeP | b4159 | 0.45 | -2.1 |
4,385,572 | + | yjeP | b4159 | 0.45 | -2.4 |
4,385,588 | + | yjeP | b4159 | 0.46 | -1.4 |
4,385,605 | - | yjeP | b4159 | 0.46 | -5.1 |
4,385,605 | - | yjeP | b4159 | 0.46 | -3.4 |
4,385,615 | - | yjeP | b4159 | 0.46 | -3.2 |
4,385,665 | + | yjeP | b4159 | 0.48 | -2.1 |
4,385,665 | + | yjeP | b4159 | 0.48 | -2.9 |
4,385,665 | + | yjeP | b4159 | 0.48 | -3.5 |
4,385,691 | + | yjeP | b4159 | 0.49 | -5.5 |
4,385,696 | - | yjeP | b4159 | 0.49 | -0.9 |
4,385,792 | - | yjeP | b4159 | 0.52 | -3.7 |
4,385,803 | - | yjeP | b4159 | 0.52 | -5.0 |
4,385,818 | - | yjeP | b4159 | 0.53 | -4.4 |
4,385,844 | + | yjeP | b4159 | 0.53 | -2.1 |
4,385,925 | + | yjeP | b4159 | 0.56 | -3.2 |
4,385,949 | + | yjeP | b4159 | 0.57 | -5.0 |
4,385,974 | + | yjeP | b4159 | 0.57 | -1.9 |
4,385,981 | + | yjeP | b4159 | 0.57 | -0.7 |
4,385,981 | + | yjeP | b4159 | 0.57 | -5.1 |
4,386,007 | - | yjeP | b4159 | 0.58 | -1.9 |
4,386,029 | - | yjeP | b4159 | 0.59 | -3.1 |
4,386,041 | + | yjeP | b4159 | 0.59 | -3.9 |
4,386,050 | - | yjeP | b4159 | 0.60 | -3.0 |
4,386,079 | - | yjeP | b4159 | 0.60 | -2.4 |
4,386,080 | + | yjeP | b4159 | 0.60 | -1.1 |
4,386,099 | + | yjeP | b4159 | 0.61 | -2.1 |
4,386,099 | + | yjeP | b4159 | 0.61 | -2.3 |
4,386,107 | - | yjeP | b4159 | 0.61 | -3.9 |
4,386,126 | - | yjeP | b4159 | 0.62 | -2.7 |
4,386,170 | - | yjeP | b4159 | 0.63 | -4.4 |
4,386,188 | + | yjeP | b4159 | 0.64 | -3.6 |
4,386,188 | + | yjeP | b4159 | 0.64 | -1.4 |
4,386,193 | - | yjeP | b4159 | 0.64 | -3.0 |
4,386,209 | - | yjeP | b4159 | 0.64 | -3.7 |
4,386,230 | + | yjeP | b4159 | 0.65 | +0.9 |
4,386,230 | + | yjeP | b4159 | 0.65 | -0.1 |
4,386,287 | - | yjeP | b4159 | 0.67 | -3.9 |
4,386,296 | + | yjeP | b4159 | 0.67 | -5.3 |
4,386,299 | - | yjeP | b4159 | 0.67 | -1.7 |
4,386,299 | - | yjeP | b4159 | 0.67 | -1.7 |
4,386,399 | - | yjeP | b4159 | 0.70 | -0.1 |
4,386,423 | + | yjeP | b4159 | 0.71 | -4.1 |
4,386,451 | + | yjeP | b4159 | 0.72 | -0.1 |
4,386,451 | + | yjeP | b4159 | 0.72 | -1.7 |
4,386,455 | + | yjeP | b4159 | 0.72 | -2.3 |
4,386,501 | + | yjeP | b4159 | 0.73 | -4.3 |
4,386,504 | - | yjeP | b4159 | 0.73 | -4.7 |
4,386,514 | - | yjeP | b4159 | 0.74 | -3.9 |
4,386,544 | - | yjeP | b4159 | 0.74 | -2.1 |
4,386,544 | - | yjeP | b4159 | 0.74 | -3.3 |
4,386,548 | + | yjeP | b4159 | 0.75 | -1.4 |
4,386,565 | + | yjeP | b4159 | 0.75 | -1.1 |
4,386,565 | + | yjeP | b4159 | 0.75 | -2.7 |
4,386,600 | - | yjeP | b4159 | 0.76 | -2.8 |
4,386,644 | + | yjeP | b4159 | 0.77 | -3.0 |
4,386,644 | + | yjeP | b4159 | 0.77 | -2.8 |
4,386,692 | - | yjeP | b4159 | 0.79 | -5.0 |
4,386,779 | - | yjeP | b4159 | 0.81 | -5.6 |
4,386,829 | - | yjeP | b4159 | 0.83 | -3.6 |
4,386,841 | + | yjeP | b4159 | 0.83 | -3.4 |
4,386,853 | - | yjeP | b4159 | 0.84 | -4.1 |
4,386,861 | - | yjeP | b4159 | 0.84 | -3.7 |
4,386,861 | - | yjeP | b4159 | 0.84 | -3.6 |
4,386,863 | - | yjeP | b4159 | 0.84 | -3.4 |
4,387,015 | - | yjeP | b4159 | 0.89 | -4.5 |
4,387,015 | - | yjeP | b4159 | 0.89 | -1.9 |
4,387,020 | - | yjeP | b4159 | 0.89 | -3.3 |
4,387,025 | - | yjeP | b4159 | 0.89 | -4.3 |
4,387,050 | - | yjeP | b4159 | 0.90 | -3.1 |
4,387,050 | - | yjeP | b4159 | 0.90 | -1.9 |
4,387,115 | - | -3.5 | |||
4,387,138 | - | -1.7 | |||
4,387,150 | - | -2.9 | |||
4,387,155 | - | -3.2 | |||
4,387,201 | + | -2.6 | |||
4,387,201 | + | -3.6 | |||
4,387,250 | - | -3.4 | |||
4,387,250 | - | -3.9 | |||
4,387,253 | + | -2.3 | |||
4,387,260 | - | -1.4 | |||
4,387,260 | - | -3.4 | |||
4,387,260 | - | -3.5 | |||
4,387,270 | - | -3.7 | |||
4,387,270 | - | -5.0 | |||
4,387,345 | + | -2.4 | |||
4,387,345 | + | -5.2 | |||
4,387,345 | + | -3.4 | |||
4,387,345 | + | -2.4 | |||
4,387,353 | - | -4.4 | |||
4,387,355 | - | -0.4 | |||
4,387,400 | - | -0.8 | |||
4,387,413 | + | -1.9 | |||
4,387,494 | + | -4.1 | |||
4,387,531 | - | psd | b4160 | 0.12 | +1.3 |
4,388,388 | + | -1.1 | |||
4,388,388 | + | -0.7 |
Or see this region's nucleotide sequence