Strain Fitness in Escherichia coli BW25113 around b3683

Experiment: LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntyidL and glvG overlap by 4 nucleotidesglvG and glvC overlap by 1 nucleotidesglvC and yidP are separated by 295 nucleotides b3680: yidL - predicted DNA-binding transcriptional regulator (RefSeq), at 3,858,306 to 3,859,199 yidL b4556: glvG - no description, at 3,859,196 to 3,860,010 glvG b3683: glvC - arbutin specific enzyme IIC component of PTS (RefSeq), at 3,860,010 to 3,861,626 glvC b3684: yidP - predicted DNA-binding transcriptional regulator (NCBI), at 3,861,922 to 3,862,638 yidP Position (kb) 3860 3861 3862Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 3859.024 kb on - strand, within yidLat 3859.044 kb on - strand, within yidLat 3859.044 kb on - strand, within yidLat 3859.044 kb on - strand, within yidLat 3859.147 kb on - strandat 3859.147 kb on - strandat 3859.170 kb on + strandat 3859.207 kb on - strandat 3859.207 kb on - strandat 3859.214 kb on - strandat 3859.241 kb on + strandat 3859.246 kb on + strandat 3859.272 kb on - strandat 3859.324 kb on + strand, within glvGat 3859.342 kb on - strand, within glvGat 3859.354 kb on - strand, within glvGat 3859.388 kb on - strand, within glvGat 3859.406 kb on - strand, within glvGat 3859.409 kb on - strand, within glvGat 3859.500 kb on - strand, within glvGat 3859.503 kb on + strand, within glvGat 3859.503 kb on + strand, within glvGat 3859.556 kb on - strand, within glvGat 3859.570 kb on - strand, within glvGat 3859.577 kb on - strand, within glvGat 3859.585 kb on - strand, within glvGat 3859.591 kb on + strand, within glvGat 3859.591 kb on + strand, within glvGat 3859.654 kb on + strand, within glvGat 3859.662 kb on - strand, within glvGat 3859.662 kb on - strand, within glvGat 3859.764 kb on - strand, within glvGat 3859.813 kb on + strand, within glvGat 3859.813 kb on + strand, within glvGat 3859.833 kb on - strand, within glvGat 3859.850 kb on + strand, within glvGat 3859.858 kb on - strand, within glvGat 3859.858 kb on - strand, within glvGat 3859.922 kb on + strand, within glvGat 3859.963 kb on - strandat 3859.963 kb on - strandat 3860.074 kb on + strandat 3860.083 kb on - strandat 3860.084 kb on + strandat 3860.099 kb on + strandat 3860.106 kb on - strandat 3860.131 kb on - strandat 3860.135 kb on - strandat 3860.139 kb on + strandat 3860.139 kb on + strandat 3860.198 kb on + strand, within glvCat 3860.198 kb on + strand, within glvCat 3860.198 kb on - strand, within glvCat 3860.206 kb on - strand, within glvCat 3860.258 kb on + strandat 3860.326 kb on - strand, within glvCat 3860.352 kb on + strand, within glvCat 3860.360 kb on - strand, within glvCat 3860.380 kb on + strand, within glvCat 3860.389 kb on + strand, within glvCat 3860.397 kb on - strand, within glvCat 3860.397 kb on - strand, within glvCat 3860.430 kb on + strand, within glvCat 3860.437 kb on + strand, within glvCat 3860.450 kb on - strand, within glvCat 3860.542 kb on + strand, within glvCat 3860.549 kb on + strand, within glvCat 3860.555 kb on + strand, within glvCat 3860.555 kb on + strand, within glvCat 3860.587 kb on - strand, within glvCat 3860.587 kb on - strand, within glvCat 3860.636 kb on - strand, within glvCat 3860.702 kb on - strand, within glvCat 3860.876 kb on - strand, within glvCat 3860.876 kb on - strand, within glvCat 3860.886 kb on + strand, within glvCat 3860.891 kb on - strand, within glvCat 3860.894 kb on - strand, within glvCat 3860.923 kb on - strand, within glvCat 3860.977 kb on - strand, within glvCat 3860.977 kb on - strand, within glvCat 3860.979 kb on + strand, within glvCat 3861.009 kb on + strand, within glvCat 3861.064 kb on - strand, within glvCat 3861.073 kb on - strand, within glvCat 3861.076 kb on - strand, within glvCat 3861.081 kb on + strand, within glvCat 3861.104 kb on + strand, within glvCat 3861.104 kb on - strand, within glvCat 3861.162 kb on + strand, within glvCat 3861.181 kb on - strand, within glvCat 3861.181 kb on - strand, within glvCat 3861.222 kb on + strand, within glvCat 3861.248 kb on + strand, within glvCat 3861.250 kb on + strand, within glvCat 3861.250 kb on - strand, within glvCat 3861.250 kb on - strand, within glvCat 3861.330 kb on + strand, within glvCat 3861.330 kb on + strand, within glvCat 3861.425 kb on + strand, within glvCat 3861.432 kb on + strand, within glvCat 3861.432 kb on + strand, within glvCat 3861.432 kb on + strand, within glvCat 3861.503 kb on + strandat 3861.539 kb on + strandat 3861.539 kb on + strandat 3861.546 kb on + strandat 3861.586 kb on - strandat 3861.586 kb on - strandat 3861.701 kb on + strandat 3861.770 kb on + strandat 3861.805 kb on + strandat 3861.805 kb on + strandat 3861.821 kb on - strandat 3861.823 kb on - strandat 3861.883 kb on + strandat 3862.043 kb on - strand, within yidPat 3862.065 kb on + strand, within yidPat 3862.074 kb on - strand, within yidPat 3862.098 kb on + strand, within yidPat 3862.251 kb on + strand, within yidPat 3862.369 kb on + strand, within yidPat 3862.375 kb on + strand, within yidPat 3862.375 kb on + strand, within yidPat 3862.393 kb on - strand, within yidPat 3862.393 kb on - strand, within yidPat 3862.399 kb on - strand, within yidPat 3862.403 kb on + strand, within yidPat 3862.443 kb on - strand, within yidPat 3862.454 kb on - strand, within yidPat 3862.532 kb on + strand, within yidPat 3862.532 kb on + strand, within yidPat 3862.538 kb on - strand, within yidPat 3862.538 kb on - strand, within yidPat 3862.538 kb on - strand, within yidPat 3862.572 kb on + strandat 3862.572 kb on + strandat 3862.591 kb on + strandat 3862.600 kb on - strandat 3862.625 kb on - strandat 3862.625 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM
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3,859,024 - yidL b3680 0.80 -2.2
3,859,044 - yidL b3680 0.83 +1.4
3,859,044 - yidL b3680 0.83 +0.1
3,859,044 - yidL b3680 0.83 +0.5
3,859,147 - +1.1
3,859,147 - -0.1
3,859,170 + -2.1
3,859,207 - +0.3
3,859,207 - +0.3
3,859,214 - -1.5
3,859,241 + -0.7
3,859,246 + +1.9
3,859,272 - -1.8
3,859,324 + glvG b4556 0.16 +0.8
3,859,342 - glvG b4556 0.18 -0.4
3,859,354 - glvG b4556 0.19 -1.6
3,859,388 - glvG b4556 0.24 +1.5
3,859,406 - glvG b4556 0.26 +1.2
3,859,409 - glvG b4556 0.26 -1.5
3,859,500 - glvG b4556 0.37 -2.9
3,859,503 + glvG b4556 0.38 -0.7
3,859,503 + glvG b4556 0.38 +1.9
3,859,556 - glvG b4556 0.44 +0.9
3,859,570 - glvG b4556 0.46 -3.2
3,859,577 - glvG b4556 0.47 -0.4
3,859,585 - glvG b4556 0.48 +0.8
3,859,591 + glvG b4556 0.48 -0.8
3,859,591 + glvG b4556 0.48 -1.7
3,859,654 + glvG b4556 0.56 +0.9
3,859,662 - glvG b4556 0.57 -0.7
3,859,662 - glvG b4556 0.57 -0.2
3,859,764 - glvG b4556 0.70 +0.5
3,859,813 + glvG b4556 0.76 +0.5
3,859,813 + glvG b4556 0.76 +0.5
3,859,833 - glvG b4556 0.78 +1.2
3,859,850 + glvG b4556 0.80 -1.9
3,859,858 - glvG b4556 0.81 -0.4
3,859,858 - glvG b4556 0.81 +2.2
3,859,922 + glvG b4556 0.89 +0.2
3,859,963 - -1.1
3,859,963 - +1.5
3,860,074 + -0.4
3,860,083 - +1.9
3,860,084 + -0.2
3,860,099 + +0.7
3,860,106 - +0.7
3,860,131 - -0.5
3,860,135 - -1.3
3,860,139 + +0.1
3,860,139 + -1.3
3,860,198 + glvC b3683 0.12 +0.7
3,860,198 + glvC b3683 0.12 -1.9
3,860,198 - glvC b3683 0.12 -1.3
3,860,206 - glvC b3683 0.12 -0.5
3,860,258 + -0.8
3,860,326 - glvC b3683 0.20 -0.8
3,860,352 + glvC b3683 0.21 +0.8
3,860,360 - glvC b3683 0.22 +0.6
3,860,380 + glvC b3683 0.23 -0.3
3,860,389 + glvC b3683 0.23 -0.3
3,860,397 - glvC b3683 0.24 +3.8
3,860,397 - glvC b3683 0.24 +2.0
3,860,430 + glvC b3683 0.26 +1.6
3,860,437 + glvC b3683 0.26 -1.4
3,860,450 - glvC b3683 0.27 +2.8
3,860,542 + glvC b3683 0.33 +2.6
3,860,549 + glvC b3683 0.33 +1.2
3,860,555 + glvC b3683 0.34 +0.6
3,860,555 + glvC b3683 0.34 +1.0
3,860,587 - glvC b3683 0.36 -1.7
3,860,587 - glvC b3683 0.36 +1.5
3,860,636 - glvC b3683 0.39 +1.2
3,860,702 - glvC b3683 0.43 -0.5
3,860,876 - glvC b3683 0.54 +0.7
3,860,876 - glvC b3683 0.54 +0.3
3,860,886 + glvC b3683 0.54 -0.8
3,860,891 - glvC b3683 0.54 +0.2
3,860,894 - glvC b3683 0.55 -1.1
3,860,923 - glvC b3683 0.56 +0.9
3,860,977 - glvC b3683 0.60 +0.2
3,860,977 - glvC b3683 0.60 +0.4
3,860,979 + glvC b3683 0.60 -2.2
3,861,009 + glvC b3683 0.62 +0.5
3,861,064 - glvC b3683 0.65 +0.9
3,861,073 - glvC b3683 0.66 -1.5
3,861,076 - glvC b3683 0.66 -0.3
3,861,081 + glvC b3683 0.66 -0.1
3,861,104 + glvC b3683 0.68 -1.5
3,861,104 - glvC b3683 0.68 -3.3
3,861,162 + glvC b3683 0.71 +1.5
3,861,181 - glvC b3683 0.72 -0.3
3,861,181 - glvC b3683 0.72 -0.2
3,861,222 + glvC b3683 0.75 -1.7
3,861,248 + glvC b3683 0.77 +0.3
3,861,250 + glvC b3683 0.77 +1.5
3,861,250 - glvC b3683 0.77 -0.8
3,861,250 - glvC b3683 0.77 +0.5
3,861,330 + glvC b3683 0.82 -1.0
3,861,330 + glvC b3683 0.82 +1.1
3,861,425 + glvC b3683 0.88 +2.7
3,861,432 + glvC b3683 0.88 -0.1
3,861,432 + glvC b3683 0.88 -2.7
3,861,432 + glvC b3683 0.88 +1.7
3,861,503 + -0.1
3,861,539 + -0.7
3,861,539 + +0.4
3,861,546 + +0.7
3,861,586 - -0.3
3,861,586 - -0.3
3,861,701 + +0.0
3,861,770 + -0.1
3,861,805 + +1.3
3,861,805 + -1.8
3,861,821 - -0.2
3,861,823 - +0.6
3,861,883 + -0.6
3,862,043 - yidP b3684 0.17 -1.8
3,862,065 + yidP b3684 0.20 +0.3
3,862,074 - yidP b3684 0.21 +1.2
3,862,098 + yidP b3684 0.25 -1.5
3,862,251 + yidP b3684 0.46 +0.8
3,862,369 + yidP b3684 0.62 -0.2
3,862,375 + yidP b3684 0.63 -0.2
3,862,375 + yidP b3684 0.63 -2.4
3,862,393 - yidP b3684 0.66 -0.8
3,862,393 - yidP b3684 0.66 -0.8
3,862,399 - yidP b3684 0.67 -0.8
3,862,403 + yidP b3684 0.67 -1.8
3,862,443 - yidP b3684 0.73 +1.5
3,862,454 - yidP b3684 0.74 +1.9
3,862,532 + yidP b3684 0.85 -0.3
3,862,532 + yidP b3684 0.85 +2.2
3,862,538 - yidP b3684 0.86 -3.2
3,862,538 - yidP b3684 0.86 -0.7
3,862,538 - yidP b3684 0.86 +0.2
3,862,572 + -0.5
3,862,572 + -0.3
3,862,591 + -0.2
3,862,600 - +1.0
3,862,625 - +1.7
3,862,625 - +0.7

Or see this region's nucleotide sequence