Experiment: LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yjjN and mdoB are separated by 137 nucleotides mdoB and yjjA are separated by 253 nucleotides yjjA and dnaC are separated by 48 nucleotides
b4358: yjjN - predicted oxidoreductase, Zn-dependent and NAD(P)-binding (RefSeq), at 4,594,013 to 4,595,035
yjjN
b4359: mdoB - phosphoglycerol transferase I (VIMSS), at 4,595,173 to 4,597,464
mdoB
b4360: yjjA - putative glycoprotein/receptor (VIMSS), at 4,597,718 to 4,598,212
yjjA
b4361: dnaC - DNA biosynthesis protein (NCBI), at 4,598,261 to 4,598,998
dnaC
Position (kb)
4595
4596
4597
4598 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 4594.195 kb on - strand, within yjjN at 4594.195 kb on - strand, within yjjN at 4594.212 kb on - strand, within yjjN at 4594.223 kb on - strand, within yjjN at 4594.223 kb on - strand, within yjjN at 4594.260 kb on + strand, within yjjN at 4594.260 kb on + strand, within yjjN at 4594.271 kb on - strand, within yjjN at 4594.271 kb on - strand, within yjjN at 4594.272 kb on + strand, within yjjN at 4594.273 kb on + strand, within yjjN at 4594.274 kb on - strand, within yjjN at 4594.275 kb on + strand, within yjjN at 4594.280 kb on - strand, within yjjN at 4594.280 kb on - strand, within yjjN at 4594.280 kb on - strand, within yjjN at 4594.281 kb on - strand, within yjjN at 4594.281 kb on - strand, within yjjN at 4594.284 kb on + strand, within yjjN at 4594.294 kb on - strand, within yjjN at 4594.294 kb on - strand, within yjjN at 4594.302 kb on - strand, within yjjN at 4594.326 kb on - strand, within yjjN at 4594.350 kb on + strand, within yjjN at 4594.354 kb on + strand, within yjjN at 4594.363 kb on - strand, within yjjN at 4594.363 kb on - strand, within yjjN at 4594.419 kb on + strand, within yjjN at 4594.427 kb on - strand, within yjjN at 4594.427 kb on - strand, within yjjN at 4594.427 kb on - strand, within yjjN at 4594.464 kb on - strand, within yjjN at 4594.466 kb on - strand, within yjjN at 4594.483 kb on - strand, within yjjN at 4594.538 kb on - strand, within yjjN at 4594.544 kb on - strand, within yjjN at 4594.604 kb on - strand, within yjjN at 4594.710 kb on - strand, within yjjN at 4594.739 kb on + strand, within yjjN at 4594.750 kb on - strand, within yjjN at 4594.750 kb on - strand, within yjjN at 4594.798 kb on + strand, within yjjN at 4594.806 kb on - strand, within yjjN at 4594.806 kb on - strand, within yjjN at 4594.806 kb on - strand, within yjjN at 4594.856 kb on + strand, within yjjN at 4594.872 kb on - strand, within yjjN at 4594.872 kb on - strand, within yjjN at 4594.941 kb on - strand at 4594.941 kb on - strand at 4594.943 kb on + strand at 4594.943 kb on + strand at 4594.945 kb on - strand at 4594.950 kb on - strand at 4594.950 kb on - strand at 4594.955 kb on - strand at 4594.984 kb on - strand at 4594.984 kb on - strand at 4595.072 kb on + strand at 4595.072 kb on + strand at 4595.128 kb on - strand at 4595.128 kb on - strand at 4595.128 kb on - strand at 4595.128 kb on - strand at 4595.129 kb on + strand at 4595.131 kb on + strand at 4595.137 kb on - strand at 4595.137 kb on - strand at 4595.146 kb on + strand at 4595.152 kb on - strand at 4595.154 kb on - strand at 4595.154 kb on - strand at 4595.156 kb on - strand at 4595.160 kb on + strand at 4595.165 kb on + strand at 4595.173 kb on - strand at 4595.178 kb on - strand at 4595.191 kb on - strand at 4595.193 kb on + strand at 4595.201 kb on - strand at 4595.201 kb on - strand at 4595.229 kb on - strand at 4595.289 kb on + strand at 4595.301 kb on - strand at 4595.320 kb on - strand at 4595.325 kb on - strand at 4595.325 kb on - strand at 4595.330 kb on - strand at 4595.333 kb on - strand at 4595.345 kb on - strand at 4595.345 kb on - strand at 4595.357 kb on - strand at 4595.466 kb on - strand, within mdoB at 4595.490 kb on - strand, within mdoB at 4595.490 kb on - strand, within mdoB at 4595.514 kb on + strand, within mdoB at 4595.514 kb on + strand, within mdoB at 4595.517 kb on - strand, within mdoB at 4595.623 kb on - strand, within mdoB at 4595.642 kb on - strand, within mdoB at 4595.642 kb on - strand, within mdoB at 4595.653 kb on + strand, within mdoB at 4595.691 kb on - strand, within mdoB at 4595.715 kb on - strand, within mdoB at 4595.736 kb on + strand, within mdoB at 4595.752 kb on - strand, within mdoB at 4595.780 kb on + strand, within mdoB at 4595.785 kb on + strand, within mdoB at 4595.787 kb on + strand, within mdoB at 4595.858 kb on - strand, within mdoB at 4595.873 kb on - strand, within mdoB at 4595.873 kb on - strand, within mdoB at 4595.929 kb on - strand, within mdoB at 4596.005 kb on - strand, within mdoB at 4596.005 kb on - strand, within mdoB at 4596.015 kb on + strand, within mdoB at 4596.019 kb on + strand, within mdoB at 4596.019 kb on + strand, within mdoB at 4596.037 kb on - strand, within mdoB at 4596.089 kb on + strand, within mdoB at 4596.116 kb on - strand, within mdoB at 4596.131 kb on + strand, within mdoB at 4596.136 kb on + strand, within mdoB at 4596.152 kb on - strand, within mdoB at 4596.162 kb on - strand, within mdoB at 4596.245 kb on - strand, within mdoB at 4596.250 kb on - strand, within mdoB at 4596.252 kb on - strand, within mdoB at 4596.261 kb on - strand, within mdoB at 4596.261 kb on - strand, within mdoB at 4596.261 kb on - strand, within mdoB at 4596.263 kb on + strand, within mdoB at 4596.276 kb on - strand, within mdoB at 4596.280 kb on + strand, within mdoB at 4596.280 kb on + strand, within mdoB at 4596.283 kb on - strand, within mdoB at 4596.304 kb on - strand, within mdoB at 4596.316 kb on - strand, within mdoB at 4596.340 kb on - strand, within mdoB at 4596.375 kb on - strand, within mdoB at 4596.438 kb on + strand, within mdoB at 4596.438 kb on + strand, within mdoB at 4596.446 kb on + strand, within mdoB at 4596.460 kb on + strand, within mdoB at 4596.468 kb on - strand, within mdoB at 4596.468 kb on - strand, within mdoB at 4596.468 kb on - strand, within mdoB at 4596.468 kb on - strand, within mdoB at 4596.478 kb on - strand, within mdoB at 4596.478 kb on - strand, within mdoB at 4596.498 kb on - strand, within mdoB at 4596.535 kb on + strand, within mdoB at 4596.553 kb on + strand, within mdoB at 4596.566 kb on - strand, within mdoB at 4596.569 kb on + strand, within mdoB at 4596.569 kb on + strand, within mdoB at 4596.606 kb on + strand, within mdoB at 4596.606 kb on + strand, within mdoB at 4596.614 kb on - strand, within mdoB at 4596.616 kb on + strand, within mdoB at 4596.633 kb on - strand, within mdoB at 4596.717 kb on + strand, within mdoB at 4596.776 kb on + strand, within mdoB at 4596.783 kb on - strand, within mdoB at 4596.784 kb on - strand, within mdoB at 4596.806 kb on - strand, within mdoB at 4596.806 kb on - strand, within mdoB at 4596.810 kb on - strand, within mdoB at 4596.813 kb on - strand, within mdoB at 4596.813 kb on - strand, within mdoB at 4596.838 kb on + strand, within mdoB at 4596.838 kb on + strand, within mdoB at 4596.900 kb on + strand, within mdoB at 4596.900 kb on + strand, within mdoB at 4596.920 kb on - strand, within mdoB at 4596.935 kb on + strand, within mdoB at 4596.973 kb on - strand, within mdoB at 4596.973 kb on - strand, within mdoB at 4596.975 kb on + strand, within mdoB at 4597.011 kb on + strand, within mdoB at 4597.158 kb on + strand, within mdoB at 4597.158 kb on + strand, within mdoB at 4597.173 kb on + strand, within mdoB at 4597.173 kb on + strand, within mdoB at 4597.183 kb on - strand, within mdoB at 4597.183 kb on - strand, within mdoB at 4597.190 kb on + strand, within mdoB at 4597.190 kb on + strand, within mdoB at 4597.195 kb on - strand, within mdoB at 4597.195 kb on - strand, within mdoB at 4597.199 kb on + strand, within mdoB at 4597.210 kb on - strand, within mdoB at 4597.215 kb on - strand, within mdoB at 4597.220 kb on - strand, within mdoB at 4597.220 kb on - strand, within mdoB at 4597.270 kb on + strand at 4597.276 kb on + strand at 4597.276 kb on + strand at 4597.365 kb on - strand at 4597.398 kb on - strand at 4597.437 kb on - strand at 4597.527 kb on - strand at 4597.531 kb on + strand at 4597.531 kb on + strand at 4597.538 kb on + strand at 4597.538 kb on + strand at 4597.543 kb on - strand at 4597.616 kb on + strand at 4597.626 kb on + strand at 4597.626 kb on + strand at 4597.634 kb on - strand at 4597.634 kb on - strand at 4597.656 kb on + strand at 4597.671 kb on - strand at 4597.695 kb on + strand at 4597.738 kb on - strand at 4597.738 kb on - strand at 4597.738 kb on - strand at 4597.750 kb on - strand at 4597.750 kb on - strand at 4597.751 kb on - strand at 4597.755 kb on - strand at 4597.762 kb on + strand at 4597.802 kb on - strand, within yjjA at 4597.892 kb on + strand, within yjjA at 4597.941 kb on + strand, within yjjA at 4597.978 kb on - strand, within yjjA at 4598.000 kb on - strand, within yjjA at 4598.117 kb on - strand, within yjjA at 4598.220 kb on - strand at 4598.220 kb on - strand at 4598.235 kb on - strand at 4598.240 kb on - strand at 4598.240 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM remove 4,594,195 - yjjN b4358 0.18 -0.7 4,594,195 - yjjN b4358 0.18 +1.0 4,594,212 - yjjN b4358 0.19 +0.6 4,594,223 - yjjN b4358 0.21 +0.3 4,594,223 - yjjN b4358 0.21 -2.4 4,594,260 + yjjN b4358 0.24 +0.3 4,594,260 + yjjN b4358 0.24 +1.5 4,594,271 - yjjN b4358 0.25 +0.3 4,594,271 - yjjN b4358 0.25 +1.3 4,594,272 + yjjN b4358 0.25 +1.8 4,594,273 + yjjN b4358 0.25 -1.2 4,594,274 - yjjN b4358 0.26 -1.5 4,594,275 + yjjN b4358 0.26 +1.3 4,594,280 - yjjN b4358 0.26 +1.3 4,594,280 - yjjN b4358 0.26 -0.3 4,594,280 - yjjN b4358 0.26 -0.7 4,594,281 - yjjN b4358 0.26 +0.3 4,594,281 - yjjN b4358 0.26 -0.3 4,594,284 + yjjN b4358 0.26 -0.3 4,594,294 - yjjN b4358 0.27 +1.3 4,594,294 - yjjN b4358 0.27 +0.3 4,594,302 - yjjN b4358 0.28 -1.7 4,594,326 - yjjN b4358 0.31 -0.2 4,594,350 + yjjN b4358 0.33 -0.1 4,594,354 + yjjN b4358 0.33 +0.1 4,594,363 - yjjN b4358 0.34 -0.0 4,594,363 - yjjN b4358 0.34 -1.0 4,594,419 + yjjN b4358 0.40 -0.6 4,594,427 - yjjN b4358 0.40 +1.3 4,594,427 - yjjN b4358 0.40 +0.7 4,594,427 - yjjN b4358 0.40 -0.6 4,594,464 - yjjN b4358 0.44 -1.2 4,594,466 - yjjN b4358 0.44 -0.6 4,594,483 - yjjN b4358 0.46 -0.4 4,594,538 - yjjN b4358 0.51 +0.9 4,594,544 - yjjN b4358 0.52 -0.3 4,594,604 - yjjN b4358 0.58 +1.2 4,594,710 - yjjN b4358 0.68 +1.8 4,594,739 + yjjN b4358 0.71 -0.3 4,594,750 - yjjN b4358 0.72 +0.5 4,594,750 - yjjN b4358 0.72 -1.9 4,594,798 + yjjN b4358 0.77 +0.2 4,594,806 - yjjN b4358 0.78 -0.3 4,594,806 - yjjN b4358 0.78 +0.4 4,594,806 - yjjN b4358 0.78 +0.1 4,594,856 + yjjN b4358 0.82 -1.3 4,594,872 - yjjN b4358 0.84 +3.4 4,594,872 - yjjN b4358 0.84 -0.1 4,594,941 - +1.0 4,594,941 - -0.3 4,594,943 + +0.8 4,594,943 + -0.2 4,594,945 - -0.3 4,594,950 - -0.5 4,594,950 - -1.0 4,594,955 - +1.2 4,594,984 - +1.6 4,594,984 - +1.3 4,595,072 + +1.4 4,595,072 + +1.7 4,595,128 - +1.9 4,595,128 - -1.9 4,595,128 - -2.4 4,595,128 - +0.1 4,595,129 + +1.9 4,595,131 + -0.5 4,595,137 - +1.4 4,595,137 - +0.6 4,595,146 + +1.9 4,595,152 - +1.6 4,595,154 - +0.5 4,595,154 - +0.7 4,595,156 - -0.8 4,595,160 + +0.7 4,595,165 + +0.6 4,595,173 - -2.3 4,595,178 - -1.5 4,595,191 - -1.7 4,595,193 + -0.2 4,595,201 - -2.7 4,595,201 - -0.4 4,595,229 - -0.3 4,595,289 + -2.3 4,595,301 - -1.3 4,595,320 - -0.3 4,595,325 - -2.3 4,595,325 - -2.3 4,595,330 - -2.0 4,595,333 - -3.0 4,595,345 - -0.7 4,595,345 - -2.3 4,595,357 - -0.8 4,595,466 - mdoB b4359 0.13 -2.8 4,595,490 - mdoB b4359 0.14 -1.7 4,595,490 - mdoB b4359 0.14 -0.6 4,595,514 + mdoB b4359 0.15 +0.3 4,595,514 + mdoB b4359 0.15 +1.9 4,595,517 - mdoB b4359 0.15 -2.8 4,595,623 - mdoB b4359 0.20 -1.7 4,595,642 - mdoB b4359 0.20 -2.2 4,595,642 - mdoB b4359 0.20 -1.7 4,595,653 + mdoB b4359 0.21 -1.4 4,595,691 - mdoB b4359 0.23 -1.9 4,595,715 - mdoB b4359 0.24 -3.2 4,595,736 + mdoB b4359 0.25 -1.0 4,595,752 - mdoB b4359 0.25 -2.3 4,595,780 + mdoB b4359 0.26 -2.3 4,595,785 + mdoB b4359 0.27 -0.1 4,595,787 + mdoB b4359 0.27 -2.2 4,595,858 - mdoB b4359 0.30 -1.0 4,595,873 - mdoB b4359 0.31 +0.1 4,595,873 - mdoB b4359 0.31 -1.0 4,595,929 - mdoB b4359 0.33 -0.5 4,596,005 - mdoB b4359 0.36 +0.1 4,596,005 - mdoB b4359 0.36 -1.0 4,596,015 + mdoB b4359 0.37 -0.6 4,596,019 + mdoB b4359 0.37 -1.3 4,596,019 + mdoB b4359 0.37 -0.1 4,596,037 - mdoB b4359 0.38 -2.1 4,596,089 + mdoB b4359 0.40 -1.4 4,596,116 - mdoB b4359 0.41 -0.1 4,596,131 + mdoB b4359 0.42 -1.5 4,596,136 + mdoB b4359 0.42 -1.9 4,596,152 - mdoB b4359 0.43 -1.7 4,596,162 - mdoB b4359 0.43 -2.4 4,596,245 - mdoB b4359 0.47 -2.7 4,596,250 - mdoB b4359 0.47 -1.4 4,596,252 - mdoB b4359 0.47 -2.3 4,596,261 - mdoB b4359 0.47 +0.3 4,596,261 - mdoB b4359 0.47 -2.5 4,596,261 - mdoB b4359 0.47 -1.4 4,596,263 + mdoB b4359 0.48 -1.5 4,596,276 - mdoB b4359 0.48 -2.4 4,596,280 + mdoB b4359 0.48 -2.4 4,596,280 + mdoB b4359 0.48 -2.3 4,596,283 - mdoB b4359 0.48 -2.3 4,596,304 - mdoB b4359 0.49 -0.7 4,596,316 - mdoB b4359 0.50 -1.6 4,596,340 - mdoB b4359 0.51 +0.9 4,596,375 - mdoB b4359 0.52 -2.4 4,596,438 + mdoB b4359 0.55 -1.0 4,596,438 + mdoB b4359 0.55 -2.3 4,596,446 + mdoB b4359 0.56 -0.2 4,596,460 + mdoB b4359 0.56 -2.4 4,596,468 - mdoB b4359 0.57 -1.9 4,596,468 - mdoB b4359 0.57 -1.6 4,596,468 - mdoB b4359 0.57 +1.0 4,596,468 - mdoB b4359 0.57 -0.6 4,596,478 - mdoB b4359 0.57 -0.9 4,596,478 - mdoB b4359 0.57 +0.8 4,596,498 - mdoB b4359 0.58 -1.3 4,596,535 + mdoB b4359 0.59 -2.7 4,596,553 + mdoB b4359 0.60 -0.5 4,596,566 - mdoB b4359 0.61 +0.2 4,596,569 + mdoB b4359 0.61 -2.3 4,596,569 + mdoB b4359 0.61 -1.3 4,596,606 + mdoB b4359 0.63 -0.8 4,596,606 + mdoB b4359 0.63 -1.4 4,596,614 - mdoB b4359 0.63 -0.5 4,596,616 + mdoB b4359 0.63 -1.4 4,596,633 - mdoB b4359 0.64 -2.4 4,596,717 + mdoB b4359 0.67 -2.1 4,596,776 + mdoB b4359 0.70 +0.9 4,596,783 - mdoB b4359 0.70 -2.2 4,596,784 - mdoB b4359 0.70 -3.7 4,596,806 - mdoB b4359 0.71 -1.0 4,596,806 - mdoB b4359 0.71 -1.0 4,596,810 - mdoB b4359 0.71 -0.3 4,596,813 - mdoB b4359 0.72 +0.4 4,596,813 - mdoB b4359 0.72 -1.0 4,596,838 + mdoB b4359 0.73 -1.5 4,596,838 + mdoB b4359 0.73 -0.3 4,596,900 + mdoB b4359 0.75 -0.3 4,596,900 + mdoB b4359 0.75 -0.1 4,596,920 - mdoB b4359 0.76 -0.7 4,596,935 + mdoB b4359 0.77 -1.7 4,596,973 - mdoB b4359 0.79 -1.5 4,596,973 - mdoB b4359 0.79 -2.5 4,596,975 + mdoB b4359 0.79 -1.7 4,597,011 + mdoB b4359 0.80 -0.4 4,597,158 + mdoB b4359 0.87 -1.3 4,597,158 + mdoB b4359 0.87 -1.3 4,597,173 + mdoB b4359 0.87 -1.0 4,597,173 + mdoB b4359 0.87 -1.9 4,597,183 - mdoB b4359 0.88 -3.2 4,597,183 - mdoB b4359 0.88 +0.1 4,597,190 + mdoB b4359 0.88 -2.2 4,597,190 + mdoB b4359 0.88 -1.5 4,597,195 - mdoB b4359 0.88 -1.9 4,597,195 - mdoB b4359 0.88 +0.5 4,597,199 + mdoB b4359 0.88 -4.0 4,597,210 - mdoB b4359 0.89 -0.0 4,597,215 - mdoB b4359 0.89 -3.1 4,597,220 - mdoB b4359 0.89 -1.0 4,597,220 - mdoB b4359 0.89 -1.5 4,597,270 + -2.4 4,597,276 + -1.8 4,597,276 + -3.5 4,597,365 - -3.2 4,597,398 - -2.6 4,597,437 - -0.1 4,597,527 - +3.7 4,597,531 + +1.2 4,597,531 + +1.3 4,597,538 + +0.2 4,597,538 + +1.3 4,597,543 - +1.5 4,597,616 + +1.1 4,597,626 + +0.5 4,597,626 + -1.7 4,597,634 - -0.7 4,597,634 - +0.8 4,597,656 + +1.9 4,597,671 - -0.7 4,597,695 + -2.5 4,597,738 - +0.6 4,597,738 - -1.3 4,597,738 - +0.7 4,597,750 - -1.3 4,597,750 - -1.3 4,597,751 - -1.3 4,597,755 - +0.4 4,597,762 + +0.3 4,597,802 - yjjA b4360 0.17 -0.1 4,597,892 + yjjA b4360 0.35 -0.7 4,597,941 + yjjA b4360 0.45 +0.6 4,597,978 - yjjA b4360 0.53 +1.2 4,598,000 - yjjA b4360 0.57 -1.9 4,598,117 - yjjA b4360 0.81 -1.5 4,598,220 - -0.1 4,598,220 - -0.0 4,598,235 - +0.1 4,598,240 - -2.0 4,598,240 - -0.3
Or see this region's nucleotide sequence