Strain Fitness in Escherichia coli BW25113 around b2459

Experiment: LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nteutI and eutT overlap by 4 nucleotideseutT and eutQ overlap by 4 nucleotideseutQ and eutP overlap by 26 nucleotides b2458: eutI - predicted phosphotransacetylase subunit (NCBI), at 2,570,511 to 2,571,527 eutI b2459: eutT - predicted cobalamin adenosyltransferase in ethanolamine utilization (NCBI), at 2,571,524 to 2,572,327 eutT b2460: eutQ - hypothetical protein (NCBI), at 2,572,324 to 2,573,025 eutQ b2461: eutP - conserved protein with nucleoside triphosphate hydrolase domain (NCBI), at 2,573,000 to 2,573,479 eutP Position (kb) 2571 2572 2573Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2570.654 kb on - strand, within eutIat 2570.989 kb on + strand, within eutIat 2570.989 kb on + strand, within eutIat 2571.039 kb on + strand, within eutIat 2571.065 kb on - strand, within eutIat 2571.148 kb on + strand, within eutIat 2571.148 kb on + strand, within eutIat 2571.330 kb on - strand, within eutIat 2571.337 kb on - strand, within eutIat 2571.337 kb on - strand, within eutIat 2571.441 kb on + strandat 2571.561 kb on + strandat 2571.561 kb on + strandat 2571.564 kb on - strandat 2571.599 kb on + strandat 2571.603 kb on - strandat 2571.603 kb on - strandat 2571.655 kb on + strand, within eutTat 2571.812 kb on + strand, within eutTat 2571.924 kb on + strand, within eutTat 2571.924 kb on + strand, within eutTat 2571.985 kb on - strand, within eutTat 2571.985 kb on - strand, within eutTat 2572.113 kb on + strand, within eutTat 2572.134 kb on + strand, within eutTat 2572.134 kb on + strand, within eutTat 2572.153 kb on - strand, within eutTat 2572.405 kb on + strand, within eutQat 2572.471 kb on - strand, within eutQat 2572.471 kb on - strand, within eutQat 2572.477 kb on + strand, within eutQat 2572.539 kb on + strand, within eutQat 2572.539 kb on + strand, within eutQat 2572.539 kb on + strand, within eutQat 2572.539 kb on + strand, within eutQat 2572.584 kb on - strand, within eutQat 2573.126 kb on + strand, within eutPat 2573.186 kb on - strand, within eutPat 2573.186 kb on - strand, within eutPat 2573.222 kb on - strand, within eutPat 2573.225 kb on + strand, within eutPat 2573.225 kb on + strand, within eutPat 2573.237 kb on - strand, within eutPat 2573.260 kb on + strand, within eutPat 2573.260 kb on + strand, within eutPat 2573.278 kb on + strand, within eutPat 2573.278 kb on + strand, within eutPat 2573.279 kb on - strand, within eutPat 2573.281 kb on + strand, within eutPat 2573.281 kb on + strand, within eutPat 2573.281 kb on + strand, within eutPat 2573.281 kb on + strand, within eutPat 2573.281 kb on + strand, within eutPat 2573.281 kb on - strand, within eutPat 2573.281 kb on - strand, within eutPat 2573.282 kb on + strand, within eutPat 2573.282 kb on + strand, within eutPat 2573.283 kb on + strand, within eutPat 2573.283 kb on + strand, within eutPat 2573.283 kb on + strand, within eutPat 2573.284 kb on - strand, within eutPat 2573.286 kb on - strand, within eutPat 2573.291 kb on - strand, within eutPat 2573.291 kb on - strand, within eutPat 2573.304 kb on + strand, within eutPat 2573.304 kb on + strand, within eutPat 2573.304 kb on + strand, within eutPat 2573.312 kb on - strand, within eutPat 2573.315 kb on + strand, within eutP

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Per-strain Table

Position Strand Gene LocusTag Fraction LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM
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2,570,654 - eutI b2458 0.14 -0.5
2,570,989 + eutI b2458 0.47 -0.2
2,570,989 + eutI b2458 0.47 +1.2
2,571,039 + eutI b2458 0.52 +1.8
2,571,065 - eutI b2458 0.54 -2.0
2,571,148 + eutI b2458 0.63 -0.2
2,571,148 + eutI b2458 0.63 -0.3
2,571,330 - eutI b2458 0.81 -2.0
2,571,337 - eutI b2458 0.81 +0.5
2,571,337 - eutI b2458 0.81 +1.5
2,571,441 + +0.9
2,571,561 + +1.7
2,571,561 + +1.1
2,571,564 - -0.8
2,571,599 + +1.4
2,571,603 - +0.8
2,571,603 - -0.3
2,571,655 + eutT b2459 0.16 +1.0
2,571,812 + eutT b2459 0.36 +0.2
2,571,924 + eutT b2459 0.50 +1.3
2,571,924 + eutT b2459 0.50 +0.4
2,571,985 - eutT b2459 0.57 -0.9
2,571,985 - eutT b2459 0.57 -0.8
2,572,113 + eutT b2459 0.73 +0.9
2,572,134 + eutT b2459 0.76 +0.0
2,572,134 + eutT b2459 0.76 -1.2
2,572,153 - eutT b2459 0.78 +0.4
2,572,405 + eutQ b2460 0.12 +0.4
2,572,471 - eutQ b2460 0.21 +2.3
2,572,471 - eutQ b2460 0.21 -2.0
2,572,477 + eutQ b2460 0.22 -0.8
2,572,539 + eutQ b2460 0.31 -0.8
2,572,539 + eutQ b2460 0.31 +0.2
2,572,539 + eutQ b2460 0.31 -3.8
2,572,539 + eutQ b2460 0.31 -1.6
2,572,584 - eutQ b2460 0.37 +0.5
2,573,126 + eutP b2461 0.26 +0.6
2,573,186 - eutP b2461 0.39 -2.3
2,573,186 - eutP b2461 0.39 -1.3
2,573,222 - eutP b2461 0.46 -1.3
2,573,225 + eutP b2461 0.47 -2.0
2,573,225 + eutP b2461 0.47 -0.2
2,573,237 - eutP b2461 0.49 -0.1
2,573,260 + eutP b2461 0.54 -2.5
2,573,260 + eutP b2461 0.54 +0.6
2,573,278 + eutP b2461 0.58 +1.2
2,573,278 + eutP b2461 0.58 -1.2
2,573,279 - eutP b2461 0.58 -0.8
2,573,281 + eutP b2461 0.59 +0.8
2,573,281 + eutP b2461 0.59 -1.2
2,573,281 + eutP b2461 0.59 +0.2
2,573,281 + eutP b2461 0.59 +1.1
2,573,281 + eutP b2461 0.59 +0.5
2,573,281 - eutP b2461 0.59 +1.0
2,573,281 - eutP b2461 0.59 +0.8
2,573,282 + eutP b2461 0.59 +1.1
2,573,282 + eutP b2461 0.59 -1.3
2,573,283 + eutP b2461 0.59 -2.3
2,573,283 + eutP b2461 0.59 -1.8
2,573,283 + eutP b2461 0.59 +0.8
2,573,284 - eutP b2461 0.59 -2.0
2,573,286 - eutP b2461 0.60 +2.3
2,573,291 - eutP b2461 0.61 +2.9
2,573,291 - eutP b2461 0.61 -0.9
2,573,304 + eutP b2461 0.63 -2.9
2,573,304 + eutP b2461 0.63 +0.8
2,573,304 + eutP b2461 0.63 +3.0
2,573,312 - eutP b2461 0.65 +0.8
2,573,315 + eutP b2461 0.66 +1.7

Or see this region's nucleotide sequence