Strain Fitness in Escherichia coli BW25113 around b2269

Experiment: LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntelaC and elaD are separated by 187 nucleotideselaD and yfbK are separated by 70 nucleotides b2268: elaC - orf, hypothetical protein (VIMSS), at 2,379,630 to 2,380,547 elaC b2269: elaD - predicted enzyme (NCBI), at 2,380,735 to 2,381,946 elaD b2270: yfbK - hypothetical protein (NCBI), at 2,382,017 to 2,383,744 yfbK Position (kb) 2380 2381 2382Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2379.761 kb on + strand, within elaCat 2379.778 kb on + strand, within elaCat 2379.829 kb on - strand, within elaCat 2379.915 kb on - strand, within elaCat 2379.915 kb on - strand, within elaCat 2380.020 kb on - strand, within elaCat 2380.022 kb on + strand, within elaCat 2380.022 kb on + strand, within elaCat 2380.022 kb on + strand, within elaCat 2380.051 kb on + strand, within elaCat 2380.202 kb on + strand, within elaCat 2380.202 kb on + strand, within elaCat 2380.266 kb on + strand, within elaCat 2380.313 kb on - strand, within elaCat 2380.313 kb on - strand, within elaCat 2380.369 kb on + strand, within elaCat 2380.373 kb on + strand, within elaCat 2380.375 kb on + strand, within elaCat 2380.383 kb on - strand, within elaCat 2380.391 kb on - strand, within elaCat 2380.395 kb on + strand, within elaCat 2380.395 kb on + strand, within elaCat 2380.395 kb on + strand, within elaCat 2380.396 kb on + strand, within elaCat 2380.409 kb on + strand, within elaCat 2380.409 kb on + strand, within elaCat 2380.453 kb on + strand, within elaCat 2380.457 kb on - strandat 2380.467 kb on + strandat 2380.467 kb on + strandat 2380.467 kb on + strandat 2380.484 kb on - strandat 2380.508 kb on + strandat 2380.508 kb on + strandat 2380.575 kb on + strandat 2380.589 kb on - strandat 2380.598 kb on + strandat 2380.603 kb on + strandat 2380.603 kb on + strandat 2380.603 kb on + strandat 2380.603 kb on + strandat 2380.620 kb on - strandat 2380.656 kb on + strandat 2380.656 kb on + strandat 2380.707 kb on + strandat 2380.726 kb on + strandat 2380.731 kb on + strandat 2380.737 kb on + strandat 2380.825 kb on - strandat 2381.954 kb on - strandat 2381.988 kb on - strandat 2381.988 kb on - strandat 2381.999 kb on - strandat 2382.011 kb on - strandat 2382.011 kb on - strandat 2382.011 kb on - strandat 2382.020 kb on - strandat 2382.021 kb on - strandat 2382.025 kb on - strandat 2382.030 kb on - strandat 2382.034 kb on - strandat 2382.034 kb on - strandat 2382.035 kb on - strandat 2382.035 kb on - strandat 2382.035 kb on - strandat 2382.035 kb on - strandat 2382.037 kb on - strandat 2382.039 kb on - strandat 2382.045 kb on - strandat 2382.045 kb on - strandat 2382.045 kb on - strandat 2382.045 kb on - strandat 2382.047 kb on - strandat 2382.056 kb on - strandat 2382.083 kb on - strandat 2382.089 kb on - strandat 2382.125 kb on - strandat 2382.125 kb on - strandat 2382.125 kb on - strandat 2382.125 kb on - strandat 2382.138 kb on - strandat 2382.138 kb on - strandat 2382.141 kb on - strandat 2382.146 kb on - strandat 2382.159 kb on - strandat 2382.159 kb on - strandat 2382.159 kb on - strandat 2382.159 kb on - strandat 2382.169 kb on - strandat 2382.177 kb on + strandat 2382.183 kb on + strandat 2382.185 kb on - strandat 2382.215 kb on - strand, within yfbKat 2382.215 kb on - strand, within yfbKat 2382.217 kb on - strand, within yfbKat 2382.221 kb on + strand, within yfbKat 2382.228 kb on - strand, within yfbKat 2382.351 kb on - strand, within yfbKat 2382.361 kb on - strand, within yfbKat 2382.410 kb on + strand, within yfbKat 2382.420 kb on - strand, within yfbKat 2382.429 kb on - strand, within yfbKat 2382.429 kb on - strand, within yfbKat 2382.431 kb on - strand, within yfbKat 2382.431 kb on - strand, within yfbKat 2382.444 kb on - strand, within yfbKat 2382.489 kb on - strand, within yfbKat 2382.489 kb on - strand, within yfbKat 2382.489 kb on - strand, within yfbKat 2382.508 kb on - strand, within yfbKat 2382.529 kb on - strand, within yfbKat 2382.611 kb on - strand, within yfbKat 2382.611 kb on - strand, within yfbKat 2382.668 kb on - strand, within yfbKat 2382.688 kb on - strand, within yfbKat 2382.711 kb on - strand, within yfbKat 2382.714 kb on - strand, within yfbKat 2382.714 kb on - strand, within yfbKat 2382.856 kb on - strand, within yfbKat 2382.859 kb on + strand, within yfbKat 2382.867 kb on + strand, within yfbKat 2382.876 kb on + strand, within yfbKat 2382.876 kb on + strand, within yfbKat 2382.883 kb on - strand, within yfbKat 2382.893 kb on - strand, within yfbKat 2382.917 kb on - strand, within yfbKat 2382.917 kb on - strand, within yfbKat 2382.917 kb on - strand, within yfbKat 2382.930 kb on - strand, within yfbKat 2382.938 kb on - strand, within yfbKat 2382.939 kb on + strand, within yfbK

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Per-strain Table

Position Strand Gene LocusTag Fraction LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM
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2,379,761 + elaC b2268 0.14 -1.1
2,379,778 + elaC b2268 0.16 -3.6
2,379,829 - elaC b2268 0.22 -1.8
2,379,915 - elaC b2268 0.31 -3.5
2,379,915 - elaC b2268 0.31 -0.2
2,380,020 - elaC b2268 0.42 -2.7
2,380,022 + elaC b2268 0.43 -1.6
2,380,022 + elaC b2268 0.43 -0.2
2,380,022 + elaC b2268 0.43 -2.0
2,380,051 + elaC b2268 0.46 +0.2
2,380,202 + elaC b2268 0.62 +0.0
2,380,202 + elaC b2268 0.62 -2.9
2,380,266 + elaC b2268 0.69 -1.2
2,380,313 - elaC b2268 0.74 +2.2
2,380,313 - elaC b2268 0.74 +0.8
2,380,369 + elaC b2268 0.81 +0.8
2,380,373 + elaC b2268 0.81 -1.0
2,380,375 + elaC b2268 0.81 -0.6
2,380,383 - elaC b2268 0.82 -1.3
2,380,391 - elaC b2268 0.83 +0.8
2,380,395 + elaC b2268 0.83 -0.9
2,380,395 + elaC b2268 0.83 -1.8
2,380,395 + elaC b2268 0.83 -0.2
2,380,396 + elaC b2268 0.83 -1.2
2,380,409 + elaC b2268 0.85 +1.2
2,380,409 + elaC b2268 0.85 +1.1
2,380,453 + elaC b2268 0.90 +0.0
2,380,457 - +0.8
2,380,467 + -0.4
2,380,467 + +0.7
2,380,467 + -0.2
2,380,484 - +0.8
2,380,508 + +1.1
2,380,508 + +1.8
2,380,575 + +0.8
2,380,589 - +0.8
2,380,598 + -0.8
2,380,603 + +0.8
2,380,603 + +0.8
2,380,603 + -0.2
2,380,603 + +0.8
2,380,620 - +0.8
2,380,656 + -0.2
2,380,656 + -0.2
2,380,707 + +0.8
2,380,726 + +0.8
2,380,731 + +0.8
2,380,737 + +0.8
2,380,825 - +0.8
2,381,954 - +0.8
2,381,988 - +0.8
2,381,988 - +0.8
2,381,999 - -2.0
2,382,011 - -0.2
2,382,011 - -2.0
2,382,011 - +0.1
2,382,020 - +0.6
2,382,021 - +0.3
2,382,025 - -1.2
2,382,030 - +0.6
2,382,034 - +0.4
2,382,034 - -1.8
2,382,035 - -1.5
2,382,035 - -0.2
2,382,035 - -1.1
2,382,035 - +1.3
2,382,037 - +1.0
2,382,039 - +0.3
2,382,045 - -2.7
2,382,045 - -1.4
2,382,045 - +1.7
2,382,045 - +0.5
2,382,047 - +0.2
2,382,056 - +1.4
2,382,083 - +0.3
2,382,089 - +0.8
2,382,125 - +1.2
2,382,125 - +0.8
2,382,125 - -3.4
2,382,125 - +0.1
2,382,138 - -0.2
2,382,138 - +0.2
2,382,141 - +1.4
2,382,146 - +0.8
2,382,159 - +1.3
2,382,159 - +1.5
2,382,159 - -0.2
2,382,159 - -2.5
2,382,169 - -2.0
2,382,177 + -0.8
2,382,183 + +0.8
2,382,185 - +1.8
2,382,215 - yfbK b2270 0.11 -0.2
2,382,215 - yfbK b2270 0.11 +0.8
2,382,217 - yfbK b2270 0.12 -0.4
2,382,221 + yfbK b2270 0.12 +0.8
2,382,228 - yfbK b2270 0.12 +0.8
2,382,351 - yfbK b2270 0.19 +0.8
2,382,361 - yfbK b2270 0.20 -0.2
2,382,410 + yfbK b2270 0.23 -0.2
2,382,420 - yfbK b2270 0.23 -1.8
2,382,429 - yfbK b2270 0.24 -1.2
2,382,429 - yfbK b2270 0.24 +0.8
2,382,431 - yfbK b2270 0.24 +0.8
2,382,431 - yfbK b2270 0.24 -0.2
2,382,444 - yfbK b2270 0.25 -1.2
2,382,489 - yfbK b2270 0.27 -2.0
2,382,489 - yfbK b2270 0.27 +3.1
2,382,489 - yfbK b2270 0.27 +0.8
2,382,508 - yfbK b2270 0.28 -1.2
2,382,529 - yfbK b2270 0.30 +0.2
2,382,611 - yfbK b2270 0.34 -0.2
2,382,611 - yfbK b2270 0.34 -1.8
2,382,668 - yfbK b2270 0.38 +1.0
2,382,688 - yfbK b2270 0.39 -0.1
2,382,711 - yfbK b2270 0.40 +0.8
2,382,714 - yfbK b2270 0.40 -1.8
2,382,714 - yfbK b2270 0.40 -1.2
2,382,856 - yfbK b2270 0.49 -0.4
2,382,859 + yfbK b2270 0.49 -0.2
2,382,867 + yfbK b2270 0.49 -0.2
2,382,876 + yfbK b2270 0.50 +0.8
2,382,876 + yfbK b2270 0.50 -0.0
2,382,883 - yfbK b2270 0.50 -1.1
2,382,893 - yfbK b2270 0.51 -2.5
2,382,917 - yfbK b2270 0.52 +0.2
2,382,917 - yfbK b2270 0.52 -3.7
2,382,917 - yfbK b2270 0.52 -0.4
2,382,930 - yfbK b2270 0.53 +1.4
2,382,938 - yfbK b2270 0.53 +0.6
2,382,939 + yfbK b2270 0.53 +0.9

Or see this region's nucleotide sequence