Experiment: LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ada and yojL are separated by 73 nucleotides yojL and ompC are separated by 111 nucleotides
b2213: ada - fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase (NCBI), at 2,307,363 to 2,308,427
ada
b2214: yojL - predicted thiamine biosynthesis lipoprotein (NCBI), at 2,308,501 to 2,309,556
yojL
b2215: ompC - outer membrane porin protein C (NCBI), at 2,309,668 to 2,310,771
ompC
Position (kb)
2308
2309
2310 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2307.549 kb on - strand, within ada at 2307.562 kb on - strand, within ada at 2307.583 kb on + strand, within ada at 2307.593 kb on + strand, within ada at 2307.849 kb on - strand, within ada at 2308.153 kb on + strand, within ada at 2308.153 kb on + strand, within ada at 2308.162 kb on + strand, within ada at 2308.327 kb on + strand at 2308.337 kb on - strand at 2308.651 kb on + strand, within yojL at 2308.661 kb on - strand at 2308.661 kb on - strand, within yojL at 2308.745 kb on - strand, within yojL at 2308.784 kb on - strand, within yojL at 2308.796 kb on - strand, within yojL at 2308.916 kb on + strand, within yojL at 2308.916 kb on + strand, within yojL at 2308.964 kb on - strand, within yojL at 2308.964 kb on - strand, within yojL at 2309.070 kb on - strand, within yojL at 2309.100 kb on + strand, within yojL at 2309.123 kb on - strand, within yojL at 2309.286 kb on - strand, within yojL at 2309.286 kb on - strand, within yojL at 2309.711 kb on - strand at 2309.963 kb on + strand, within ompC at 2309.981 kb on + strand, within ompC at 2310.013 kb on + strand, within ompC at 2310.044 kb on + strand, within ompC at 2310.052 kb on - strand, within ompC at 2310.052 kb on - strand at 2310.081 kb on - strand, within ompC at 2310.091 kb on - strand, within ompC at 2310.155 kb on + strand, within ompC at 2310.192 kb on + strand, within ompC at 2310.277 kb on + strand, within ompC at 2310.340 kb on + strand, within ompC at 2310.362 kb on - strand, within ompC at 2310.362 kb on - strand, within ompC at 2310.362 kb on - strand, within ompC at 2310.442 kb on + strand, within ompC at 2310.442 kb on + strand, within ompC at 2310.490 kb on + strand, within ompC at 2310.531 kb on + strand, within ompC at 2310.532 kb on + strand, within ompC at 2310.538 kb on - strand, within ompC at 2310.538 kb on - strand, within ompC
Per-strain Table
Position Strand Gene LocusTag Fraction LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM remove 2,307,549 - ada b2213 0.17 +0.2 2,307,562 - ada b2213 0.19 -1.8 2,307,583 + ada b2213 0.21 +0.2 2,307,593 + ada b2213 0.22 -3.1 2,307,849 - ada b2213 0.46 +0.4 2,308,153 + ada b2213 0.74 +0.6 2,308,153 + ada b2213 0.74 +0.2 2,308,162 + ada b2213 0.75 -2.8 2,308,327 + +1.6 2,308,337 - +0.9 2,308,651 + yojL b2214 0.14 +1.6 2,308,661 - -1.6 2,308,661 - yojL b2214 0.15 +1.1 2,308,745 - yojL b2214 0.23 +2.0 2,308,784 - yojL b2214 0.27 -0.1 2,308,796 - yojL b2214 0.28 +1.0 2,308,916 + yojL b2214 0.39 +1.4 2,308,916 + yojL b2214 0.39 +2.6 2,308,964 - yojL b2214 0.44 +0.7 2,308,964 - yojL b2214 0.44 +2.6 2,309,070 - yojL b2214 0.54 +1.5 2,309,100 + yojL b2214 0.57 +1.8 2,309,123 - yojL b2214 0.59 +2.7 2,309,286 - yojL b2214 0.74 +2.6 2,309,286 - yojL b2214 0.74 +3.1 2,309,711 - -2.6 2,309,963 + ompC b2215 0.27 -3.3 2,309,981 + ompC b2215 0.28 -1.3 2,310,013 + ompC b2215 0.31 -1.3 2,310,044 + ompC b2215 0.34 +3.1 2,310,052 - ompC b2215 0.35 -1.8 2,310,052 - -1.3 2,310,081 - ompC b2215 0.37 -2.8 2,310,091 - ompC b2215 0.38 -0.8 2,310,155 + ompC b2215 0.44 +0.2 2,310,192 + ompC b2215 0.47 -0.3 2,310,277 + ompC b2215 0.55 +0.7 2,310,340 + ompC b2215 0.61 -0.7 2,310,362 - ompC b2215 0.63 +0.3 2,310,362 - ompC b2215 0.63 -2.4 2,310,362 - ompC b2215 0.63 -0.8 2,310,442 + ompC b2215 0.70 -0.7 2,310,442 + ompC b2215 0.70 -0.8 2,310,490 + ompC b2215 0.74 -1.4 2,310,531 + ompC b2215 0.78 -0.4 2,310,532 + ompC b2215 0.78 -0.8 2,310,538 - ompC b2215 0.79 -0.8 2,310,538 - ompC b2215 0.79 -2.3
Or see this region's nucleotide sequence