Experiment: LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt proQ and yebR are separated by 96 nucleotides yebR and yebS are separated by 129 nucleotides yebS and yebT overlap by 32 nucleotides
b1831: proQ - putative solute/DNA competence effector (NCBI), at 1,912,860 to 1,913,558
proQ
b1832: yebR - free methionine-(R)-sulfoxide reductase (RefSeq), at 1,913,655 to 1,914,152
yebR
b1833: yebS - conserved inner membrane protein (NCBI), at 1,914,282 to 1,915,565
yebS
b1834: yebT - orf, hypothetical protein (VIMSS), at 1,915,534 to 1,918,167
yebT
Position (kb) 1914
1915
1916 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 1913.405 kb on + strand, within proQ at 1913.405 kb on + strand, within proQ at 1913.413 kb on - strand, within proQ at 1913.725 kb on - strand, within yebR at 1913.752 kb on + strand, within yebR at 1913.752 kb on + strand, within yebR at 1913.760 kb on - strand, within yebR at 1913.790 kb on - strand, within yebR at 1913.790 kb on - strand, within yebR at 1913.864 kb on - strand, within yebR at 1913.864 kb on - strand, within yebR at 1913.964 kb on - strand, within yebR at 1913.964 kb on - strand, within yebR at 1913.965 kb on - strand, within yebR at 1913.984 kb on + strand, within yebR at 1914.464 kb on + strand, within yebS at 1914.615 kb on - strand, within yebS at 1914.615 kb on - strand, within yebS at 1914.688 kb on - strand, within yebS at 1914.688 kb on - strand, within yebS at 1914.735 kb on + strand, within yebS at 1914.763 kb on + strand, within yebS at 1914.763 kb on + strand, within yebS at 1914.821 kb on + strand, within yebS at 1914.953 kb on + strand, within yebS at 1914.953 kb on + strand, within yebS at 1915.011 kb on - strand, within yebS at 1915.354 kb on + strand, within yebS at 1915.457 kb on + strand at 1915.676 kb on - strand at 1915.711 kb on + strand at 1915.759 kb on + strand at 1915.909 kb on + strand, within yebT at 1915.920 kb on + strand, within yebT at 1915.975 kb on + strand, within yebT at 1916.098 kb on + strand, within yebT at 1916.277 kb on - strand, within yebT at 1916.277 kb on - strand, within yebT at 1916.307 kb on + strand, within yebT at 1916.343 kb on + strand, within yebT at 1916.351 kb on - strand, within yebT at 1916.517 kb on + strand, within yebT at 1916.533 kb on - strand, within yebT
Per-strain Table
Position Strand Gene LocusTag Fraction LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM remove 1,913,405 + proQ b1831 0.78 +0.6 1,913,405 + proQ b1831 0.78 -0.4 1,913,413 - proQ b1831 0.79 +1.4 1,913,725 - yebR b1832 0.14 -0.8 1,913,752 + yebR b1832 0.19 +0.3 1,913,752 + yebR b1832 0.19 +0.6 1,913,760 - yebR b1832 0.21 -0.9 1,913,790 - yebR b1832 0.27 -1.0 1,913,790 - yebR b1832 0.27 -1.4 1,913,864 - yebR b1832 0.42 +2.0 1,913,864 - yebR b1832 0.42 +0.3 1,913,964 - yebR b1832 0.62 -1.4 1,913,964 - yebR b1832 0.62 -2.6 1,913,965 - yebR b1832 0.62 +1.0 1,913,984 + yebR b1832 0.66 +1.6 1,914,464 + yebS b1833 0.14 -1.0 1,914,615 - yebS b1833 0.26 -1.4 1,914,615 - yebS b1833 0.26 -1.0 1,914,688 - yebS b1833 0.32 +0.5 1,914,688 - yebS b1833 0.32 +1.2 1,914,735 + yebS b1833 0.35 -1.2 1,914,763 + yebS b1833 0.37 -2.0 1,914,763 + yebS b1833 0.37 -1.7 1,914,821 + yebS b1833 0.42 -1.0 1,914,953 + yebS b1833 0.52 -0.5 1,914,953 + yebS b1833 0.52 -0.4 1,915,011 - yebS b1833 0.57 +0.5 1,915,354 + yebS b1833 0.83 +1.1 1,915,457 + +0.2 1,915,676 - -1.2 1,915,711 + -0.3 1,915,759 + -1.0 1,915,909 + yebT b1834 0.14 -2.7 1,915,920 + yebT b1834 0.15 -3.4 1,915,975 + yebT b1834 0.17 -0.3 1,916,098 + yebT b1834 0.21 -2.8 1,916,277 - yebT b1834 0.28 -1.7 1,916,277 - yebT b1834 0.28 -0.2 1,916,307 + yebT b1834 0.29 -3.9 1,916,343 + yebT b1834 0.31 -2.7 1,916,351 - yebT b1834 0.31 -0.4 1,916,517 + yebT b1834 0.37 -2.9 1,916,533 - yebT b1834 0.38 -2.4
Or see this region's nucleotide sequence