Strain Fitness in Escherichia coli BW25113 around b1384

Experiment: LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntydbH and ynbE overlap by 4 nucleotidesynbE and ydbL are separated by 7 nucleotidesydbL and feaR are separated by 171 nucleotidesfeaR and feaB are separated by 235 nucleotides b1381: ydbH - hypothetical protein (NCBI), at 1,441,075 to 1,443,714 ydbH b1382: ynbE - predicted lipoprotein (NCBI), at 1,443,711 to 1,443,896 ynbE b1383: ydbL - orf, hypothetical protein (VIMSS), at 1,443,904 to 1,444,230 ydbL b1384: feaR - DNA-binding transcriptional dual regulator (NCBI), at 1,444,402 to 1,445,307 feaR b1385: feaB - phenylacetaldehyde dehydrogenase (VIMSS), at 1,445,543 to 1,447,042 feaB Position (kb) 1444 1445 1446Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1443.414 kb on + strand, within ydbHat 1443.414 kb on + strand, within ydbHat 1443.455 kb on + strandat 1443.512 kb on - strandat 1443.522 kb on - strandat 1443.524 kb on + strandat 1443.525 kb on + strandat 1443.525 kb on + strandat 1443.532 kb on - strandat 1443.541 kb on - strandat 1443.606 kb on + strandat 1443.614 kb on + strandat 1443.622 kb on - strandat 1443.644 kb on + strandat 1443.652 kb on - strandat 1443.662 kb on - strandat 1443.662 kb on - strandat 1443.683 kb on - strandat 1443.683 kb on - strandat 1443.783 kb on + strand, within ynbEat 1443.890 kb on + strandat 1443.908 kb on + strandat 1443.951 kb on + strand, within ydbLat 1443.956 kb on + strand, within ydbLat 1443.956 kb on + strand, within ydbLat 1443.963 kb on + strand, within ydbLat 1444.102 kb on + strand, within ydbLat 1444.250 kb on + strandat 1444.250 kb on + strandat 1444.256 kb on + strandat 1444.390 kb on - strandat 1444.537 kb on - strand, within feaRat 1444.581 kb on - strand, within feaRat 1444.611 kb on - strand, within feaRat 1444.640 kb on - strand, within feaRat 1444.787 kb on - strand, within feaRat 1444.845 kb on - strand, within feaRat 1444.866 kb on - strand, within feaRat 1444.866 kb on - strand, within feaRat 1444.872 kb on - strand, within feaRat 1444.935 kb on - strand, within feaRat 1445.072 kb on + strand, within feaRat 1445.230 kb on - strandat 1445.600 kb on - strandat 1445.620 kb on - strandat 1445.830 kb on + strand, within feaBat 1445.843 kb on - strand, within feaBat 1445.934 kb on - strand, within feaBat 1445.934 kb on - strand, within feaBat 1445.934 kb on - strand, within feaBat 1445.979 kb on - strand, within feaBat 1446.256 kb on + strand, within feaBat 1446.256 kb on - strand, within feaBat 1446.256 kb on - strand, within feaB

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Per-strain Table

Position Strand Gene LocusTag Fraction LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM
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1,443,414 + ydbH b1381 0.89 -1.3
1,443,414 + ydbH b1381 0.89 +0.4
1,443,455 + -0.6
1,443,512 - +0.7
1,443,522 - +0.7
1,443,524 + -0.3
1,443,525 + +0.7
1,443,525 + -2.2
1,443,532 - -2.2
1,443,541 - -0.3
1,443,606 + +0.9
1,443,614 + -0.3
1,443,622 - -0.6
1,443,644 + -2.2
1,443,652 - -2.0
1,443,662 - -0.9
1,443,662 - +1.7
1,443,683 - -0.3
1,443,683 - +2.2
1,443,783 + ynbE b1382 0.39 -0.5
1,443,890 + -0.6
1,443,908 + +1.3
1,443,951 + ydbL b1383 0.14 +2.2
1,443,956 + ydbL b1383 0.16 -2.2
1,443,956 + ydbL b1383 0.16 +2.8
1,443,963 + ydbL b1383 0.18 +2.2
1,444,102 + ydbL b1383 0.61 -1.9
1,444,250 + -0.8
1,444,250 + +0.6
1,444,256 + -0.3
1,444,390 - -0.3
1,444,537 - feaR b1384 0.15 +1.3
1,444,581 - feaR b1384 0.20 -0.1
1,444,611 - feaR b1384 0.23 +0.5
1,444,640 - feaR b1384 0.26 +1.6
1,444,787 - feaR b1384 0.42 +0.4
1,444,845 - feaR b1384 0.49 +1.0
1,444,866 - feaR b1384 0.51 -0.8
1,444,866 - feaR b1384 0.51 +0.8
1,444,872 - feaR b1384 0.52 +1.8
1,444,935 - feaR b1384 0.59 +1.8
1,445,072 + feaR b1384 0.74 +0.3
1,445,230 - -1.5
1,445,600 - -1.1
1,445,620 - +1.0
1,445,830 + feaB b1385 0.19 +0.4
1,445,843 - feaB b1385 0.20 +2.0
1,445,934 - feaB b1385 0.26 +0.5
1,445,934 - feaB b1385 0.26 +0.5
1,445,934 - feaB b1385 0.26 +2.5
1,445,979 - feaB b1385 0.29 +0.7
1,446,256 + feaB b1385 0.48 +0.2
1,446,256 - feaB b1385 0.48 +1.1
1,446,256 - feaB b1385 0.48 -0.2

Or see this region's nucleotide sequence