Experiment: LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ybjW and ybjE are separated by 143 nucleotides ybjE and aqpZ are separated by 494 nucleotides
b0873: ybjW - putative prismane (VIMSS), at 911,385 to 913,037
ybjW
b0874: ybjE - putative surface protein (VIMSS), at 913,181 to 914,080
ybjE
b0875: aqpZ - aquaporin Z (NCBI), at 914,575 to 915,270
aqpZ
Position (kb)
913
914
915 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 912.278 kb on - strand, within ybjW at 912.349 kb on - strand, within ybjW at 912.360 kb on + strand, within ybjW at 912.406 kb on - strand, within ybjW at 912.463 kb on + strand, within ybjW at 912.465 kb on - strand, within ybjW at 912.558 kb on + strand, within ybjW at 912.630 kb on + strand, within ybjW at 912.717 kb on + strand, within ybjW at 912.721 kb on - strand, within ybjW at 912.804 kb on + strand, within ybjW at 912.813 kb on + strand, within ybjW at 912.813 kb on + strand, within ybjW at 912.813 kb on + strand, within ybjW at 912.861 kb on + strand, within ybjW at 912.869 kb on - strand, within ybjW at 912.869 kb on - strand, within ybjW at 912.968 kb on + strand at 913.267 kb on + strand at 913.291 kb on + strand, within ybjE at 913.291 kb on + strand, within ybjE at 913.317 kb on + strand, within ybjE at 913.317 kb on + strand, within ybjE at 913.335 kb on - strand, within ybjE at 913.362 kb on - strand, within ybjE at 913.362 kb on - strand, within ybjE at 913.426 kb on + strand, within ybjE at 913.505 kb on - strand, within ybjE at 913.568 kb on + strand, within ybjE at 913.568 kb on + strand, within ybjE at 913.577 kb on - strand, within ybjE at 913.577 kb on - strand, within ybjE at 913.597 kb on - strand, within ybjE at 913.597 kb on - strand, within ybjE at 913.611 kb on - strand, within ybjE at 913.611 kb on - strand, within ybjE at 913.708 kb on + strand, within ybjE at 913.729 kb on - strand, within ybjE at 913.733 kb on + strand, within ybjE at 913.733 kb on + strand, within ybjE at 913.750 kb on + strand, within ybjE at 913.812 kb on + strand, within ybjE at 913.824 kb on + strand, within ybjE at 913.824 kb on + strand, within ybjE at 913.830 kb on - strand, within ybjE at 913.897 kb on - strand, within ybjE at 913.914 kb on + strand, within ybjE at 913.922 kb on + strand, within ybjE at 913.924 kb on - strand, within ybjE at 913.934 kb on + strand, within ybjE at 913.934 kb on + strand, within ybjE at 913.939 kb on + strand, within ybjE at 914.030 kb on + strand at 914.035 kb on + strand at 914.060 kb on + strand at 914.068 kb on - strand at 914.093 kb on - strand at 914.093 kb on - strand at 914.128 kb on - strand at 914.128 kb on - strand at 914.131 kb on - strand at 914.190 kb on + strand at 914.303 kb on - strand at 914.562 kb on - strand at 914.642 kb on + strand at 914.650 kb on - strand, within aqpZ at 914.702 kb on - strand, within aqpZ at 914.720 kb on - strand, within aqpZ at 914.757 kb on + strand, within aqpZ at 914.764 kb on + strand, within aqpZ at 914.767 kb on - strand, within aqpZ at 914.767 kb on - strand, within aqpZ at 914.784 kb on + strand, within aqpZ at 914.911 kb on + strand, within aqpZ at 914.941 kb on + strand, within aqpZ at 914.941 kb on + strand, within aqpZ at 914.998 kb on + strand, within aqpZ at 914.998 kb on + strand, within aqpZ
Per-strain Table
Position Strand Gene LocusTag Fraction LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM remove 912,278 - ybjW b0873 0.54 -0.5 912,349 - ybjW b0873 0.58 -0.5 912,360 + ybjW b0873 0.59 +0.1 912,406 - ybjW b0873 0.62 -0.8 912,463 + ybjW b0873 0.65 +0.1 912,465 - ybjW b0873 0.65 -0.5 912,558 + ybjW b0873 0.71 -0.4 912,630 + ybjW b0873 0.75 +1.0 912,717 + ybjW b0873 0.81 -0.2 912,721 - ybjW b0873 0.81 -0.3 912,804 + ybjW b0873 0.86 -0.0 912,813 + ybjW b0873 0.86 +0.7 912,813 + ybjW b0873 0.86 -0.6 912,813 + ybjW b0873 0.86 +0.7 912,861 + ybjW b0873 0.89 +1.2 912,869 - ybjW b0873 0.90 -2.6 912,869 - ybjW b0873 0.90 +0.1 912,968 + +1.0 913,267 + +1.2 913,291 + ybjE b0874 0.12 -1.5 913,291 + ybjE b0874 0.12 -0.6 913,317 + ybjE b0874 0.15 -0.9 913,317 + ybjE b0874 0.15 -0.3 913,335 - ybjE b0874 0.17 +0.7 913,362 - ybjE b0874 0.20 -3.4 913,362 - ybjE b0874 0.20 +1.3 913,426 + ybjE b0874 0.27 +0.7 913,505 - ybjE b0874 0.36 -0.3 913,568 + ybjE b0874 0.43 +0.8 913,568 + ybjE b0874 0.43 -1.2 913,577 - ybjE b0874 0.44 +0.2 913,577 - ybjE b0874 0.44 +1.3 913,597 - ybjE b0874 0.46 +1.9 913,597 - ybjE b0874 0.46 +1.3 913,611 - ybjE b0874 0.48 -1.6 913,611 - ybjE b0874 0.48 -0.3 913,708 + ybjE b0874 0.59 -1.3 913,729 - ybjE b0874 0.61 +1.5 913,733 + ybjE b0874 0.61 +0.9 913,733 + ybjE b0874 0.61 +1.3 913,750 + ybjE b0874 0.63 -0.2 913,812 + ybjE b0874 0.70 +0.8 913,824 + ybjE b0874 0.71 -1.8 913,824 + ybjE b0874 0.71 +1.4 913,830 - ybjE b0874 0.72 +1.1 913,897 - ybjE b0874 0.80 -1.6 913,914 + ybjE b0874 0.81 +2.3 913,922 + ybjE b0874 0.82 +0.9 913,924 - ybjE b0874 0.83 +1.2 913,934 + ybjE b0874 0.84 +2.6 913,934 + ybjE b0874 0.84 +1.0 913,939 + ybjE b0874 0.84 +1.0 914,030 + +1.7 914,035 + -0.2 914,060 + -0.0 914,068 - -1.9 914,093 - -0.3 914,093 - +0.7 914,128 - +0.1 914,128 - +1.0 914,131 - +0.5 914,190 + -0.1 914,303 - +0.2 914,562 - +0.8 914,642 + -0.7 914,650 - aqpZ b0875 0.11 +0.1 914,702 - aqpZ b0875 0.18 +0.9 914,720 - aqpZ b0875 0.21 +1.1 914,757 + aqpZ b0875 0.26 +0.7 914,764 + aqpZ b0875 0.27 -1.3 914,767 - aqpZ b0875 0.28 -0.2 914,767 - aqpZ b0875 0.28 -2.3 914,784 + aqpZ b0875 0.30 -1.0 914,911 + aqpZ b0875 0.48 -1.3 914,941 + aqpZ b0875 0.53 +1.3 914,941 + aqpZ b0875 0.53 -0.3 914,998 + aqpZ b0875 0.61 -0.3 914,998 + aqpZ b0875 0.61 -0.3
Or see this region's nucleotide sequence