Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03605 and PS417_03610 are separated by 0 nucleotides PS417_03610 and PS417_03615 overlap by 7 nucleotides PS417_03615 and PS417_03620 overlap by 8 nucleotides PS417_03620 and PS417_03625 are separated by 112 nucleotides
PS417_03605: PS417_03605 - peptide chain release factor 1, at 820,025 to 821,107
_03605
PS417_03610: PS417_03610 - SAM-dependent methyltransferase, at 821,108 to 821,938
_03610
PS417_03615: PS417_03615 - molybdopterin-synthase adenylyltransferase, at 821,932 to 822,687
_03615
PS417_03620: PS417_03620 - glutamate racemase, at 822,680 to 823,474
_03620
PS417_03625: PS417_03625 - lipid A 3-O-deacylase, at 823,587 to 824,105
_03625
Position (kb) 821
822
823 Strain fitness (log2 ratio) -2
-1
0
1 at 821.105 kb on + strand at 821.105 kb on + strand at 822.456 kb on - strand, within PS417_03615 at 823.435 kb on - strand at 823.531 kb on + strand at 823.531 kb on + strand at 823.532 kb on - strand at 823.532 kb on - strand at 823.541 kb on + strand at 823.549 kb on - strand at 823.549 kb on - strand at 823.560 kb on + strand at 823.560 kb on + strand at 823.560 kb on + strand at 823.560 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 5 mg/mL (C) remove 821,105 + -0.3 821,105 + -2.0 822,456 - PS417_03615 0.69 -2.0 823,435 - +0.4 823,531 + +1.3 823,531 + +0.8 823,532 - +0.1 823,532 - -1.4 823,541 + +0.9 823,549 - -0.3 823,549 - -0.2 823,560 + +0.9 823,560 + -1.9 823,560 + -0.2 823,560 + +0.4
Or see this region's nucleotide sequence