Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03195 and PS417_03200 are separated by 137 nucleotides PS417_03200 and PS417_03205 are separated by 24 nucleotides PS417_03205 and PS417_03210 are separated by 194 nucleotides
PS417_03195: PS417_03195 - LysR family transcriptional regulator, at 730,889 to 731,815
_03195
PS417_03200: PS417_03200 - ArsR family transcriptional regulator, at 731,953 to 732,642
_03200
PS417_03205: PS417_03205 - adenine deaminase, at 732,667 to 733,620
_03205
PS417_03210: PS417_03210 - calcium:proton antiporter, at 733,815 to 734,906
_03210
Position (kb) 732
733
734 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 731.813 kb on + strand at 731.863 kb on - strand at 731.902 kb on - strand at 731.903 kb on + strand at 731.904 kb on - strand at 731.904 kb on - strand at 731.916 kb on - strand at 732.288 kb on - strand, within PS417_03200 at 732.344 kb on - strand, within PS417_03200 at 732.471 kb on + strand, within PS417_03200 at 732.472 kb on - strand, within PS417_03200 at 732.472 kb on - strand, within PS417_03200 at 732.472 kb on - strand at 732.645 kb on + strand at 732.645 kb on + strand at 732.646 kb on - strand at 732.646 kb on - strand at 732.646 kb on - strand at 732.669 kb on - strand at 732.677 kb on - strand at 732.773 kb on + strand, within PS417_03205 at 733.013 kb on + strand, within PS417_03205 at 733.014 kb on - strand, within PS417_03205 at 733.397 kb on + strand, within PS417_03205 at 733.397 kb on + strand, within PS417_03205 at 733.397 kb on + strand, within PS417_03205 at 733.436 kb on + strand, within PS417_03205 at 733.436 kb on + strand, within PS417_03205 at 733.436 kb on + strand, within PS417_03205 at 733.436 kb on + strand, within PS417_03205 at 733.436 kb on + strand, within PS417_03205 at 733.436 kb on + strand, within PS417_03205 at 733.436 kb on + strand, within PS417_03205 at 733.437 kb on - strand, within PS417_03205 at 733.437 kb on - strand, within PS417_03205 at 733.439 kb on + strand, within PS417_03205 at 733.440 kb on - strand, within PS417_03205 at 733.464 kb on + strand, within PS417_03205 at 733.476 kb on - strand, within PS417_03205 at 733.736 kb on + strand at 733.737 kb on - strand at 733.774 kb on + strand at 733.802 kb on + strand at 733.802 kb on + strand at 734.124 kb on + strand, within PS417_03210 at 734.125 kb on - strand, within PS417_03210 at 734.230 kb on - strand, within PS417_03210 at 734.343 kb on + strand, within PS417_03210 at 734.343 kb on + strand, within PS417_03210 at 734.343 kb on + strand, within PS417_03210 at 734.343 kb on + strand at 734.343 kb on + strand, within PS417_03210 at 734.343 kb on + strand, within PS417_03210 at 734.344 kb on - strand, within PS417_03210 at 734.344 kb on - strand, within PS417_03210 at 734.344 kb on - strand, within PS417_03210 at 734.344 kb on - strand, within PS417_03210 at 734.344 kb on - strand, within PS417_03210 at 734.382 kb on + strand, within PS417_03210 at 734.382 kb on + strand, within PS417_03210 at 734.394 kb on + strand, within PS417_03210
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 5 mg/mL (C) remove 731,813 + -1.3 731,863 - -2.1 731,902 - +0.7 731,903 + -0.0 731,904 - +0.7 731,904 - -0.1 731,916 - -0.9 732,288 - PS417_03200 0.49 -0.0 732,344 - PS417_03200 0.57 -0.1 732,471 + PS417_03200 0.75 +0.0 732,472 - PS417_03200 0.75 +0.9 732,472 - PS417_03200 0.75 +0.0 732,472 - -1.1 732,645 + +2.5 732,645 + -0.1 732,646 - +0.4 732,646 - +0.6 732,646 - +0.9 732,669 - -1.9 732,677 - -1.3 732,773 + PS417_03205 0.11 +0.2 733,013 + PS417_03205 0.36 -1.6 733,014 - PS417_03205 0.36 -2.9 733,397 + PS417_03205 0.77 -1.8 733,397 + PS417_03205 0.77 -0.6 733,397 + PS417_03205 0.77 -1.1 733,436 + PS417_03205 0.81 -1.5 733,436 + PS417_03205 0.81 -2.5 733,436 + PS417_03205 0.81 -0.8 733,436 + PS417_03205 0.81 -0.7 733,436 + PS417_03205 0.81 -0.5 733,436 + PS417_03205 0.81 -2.5 733,436 + PS417_03205 0.81 -2.0 733,437 - PS417_03205 0.81 +0.5 733,437 - PS417_03205 0.81 -1.6 733,439 + PS417_03205 0.81 -1.5 733,440 - PS417_03205 0.81 -0.5 733,464 + PS417_03205 0.84 -1.9 733,476 - PS417_03205 0.85 -1.1 733,736 + -0.6 733,737 - +3.2 733,774 + -0.1 733,802 + -1.0 733,802 + +0.9 734,124 + PS417_03210 0.28 -0.0 734,125 - PS417_03210 0.28 -1.1 734,230 - PS417_03210 0.38 +0.3 734,343 + PS417_03210 0.48 +1.5 734,343 + PS417_03210 0.48 +0.1 734,343 + PS417_03210 0.48 -0.4 734,343 + -1.4 734,343 + PS417_03210 0.48 +2.5 734,343 + PS417_03210 0.48 +0.1 734,344 - PS417_03210 0.48 +0.1 734,344 - PS417_03210 0.48 +0.2 734,344 - PS417_03210 0.48 +0.4 734,344 - PS417_03210 0.48 +0.3 734,344 - PS417_03210 0.48 +0.5 734,382 + PS417_03210 0.52 +0.2 734,382 + PS417_03210 0.52 +0.3 734,394 + PS417_03210 0.53 +0.3
Or see this region's nucleotide sequence