Strain Fitness in Pseudomonas simiae WCS417 around PS417_27010

Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 5 mg/mL (C)
5,831,519	+				+1.0
5,831,519	+				-1.0
5,831,523	+				+0.0
5,831,523	+				-0.2
5,831,523	+				+0.2
5,831,523	+				-0.3
5,831,524	-				+1.1
5,831,524	-				-0.0
5,831,524	-				+0.5
5,831,524	-				-0.7
5,831,524	-				-0.4
5,831,603	+		PS417_27000	0.18	+0.5
5,831,603	+		PS417_27000	0.18	-0.2
5,831,718	-		PS417_27000	0.43	-0.2
5,831,906	+		PS417_27000	0.83	-0.2
5,831,907	-		PS417_27000	0.83	+0.4
5,831,952	+				-1.0
5,831,952	+				+0.1
5,831,952	+				+0.0
5,831,953	-				+1.0
5,831,953	-				+0.1
5,831,975	+				+0.8
5,831,976	-				-0.2
5,831,988	-				-0.6
5,832,072	+		PS417_27005	0.21	-0.1
5,832,435	-				-0.3
5,832,461	-				+0.4
5,833,090	+		PS417_27010	0.43	-3.9
5,833,090	+		PS417_27010	0.43	-0.5
5,833,153	+		PS417_27010	0.47	-1.3
5,833,154	-		PS417_27010	0.47	-1.8
5,833,213	+		PS417_27010	0.51	-0.9
5,833,213	+		PS417_27010	0.51	-1.8
5,833,213	+		PS417_27010	0.51	+0.5
5,833,214	-		PS417_27010	0.51	-0.2
5,833,214	-		PS417_27010	0.51	-1.3
5,833,381	+				+2.0
5,833,381	+		PS417_27010	0.62	-1.1
5,833,390	+		PS417_27010	0.63	-0.9
5,833,391	-		PS417_27010	0.63	-0.3
5,833,391	-		PS417_27010	0.63	+0.1
5,833,391	-		PS417_27010	0.63	-2.3
5,833,532	-		PS417_27010	0.72	-1.8
5,833,532	-		PS417_27010	0.72	-0.4
5,833,532	-		PS417_27010	0.72	-1.1
5,833,532	-		PS417_27010	0.72	-0.7
5,833,537	+		PS417_27010	0.72	-1.0
5,833,538	-		PS417_27010	0.72	-3.1
5,833,789	+		PS417_27010	0.89	+0.5
5,833,790	-		PS417_27010	0.89	-0.6
5,833,790	-		PS417_27010	0.89	-0.4
5,833,942	+				-0.5
5,833,943	-				-2.3
5,834,048	+				+0.9
5,834,048	+				+1.1
5,834,050	+				-0.1
5,834,050	+				+1.2
5,834,050	+				+0.1
5,834,051	-				-0.6
5,834,051	-				-0.1
5,834,823	+				+0.0
5,834,823	+				+0.7
5,834,823	+				-0.4
5,834,823	+				-0.4
5,834,823	+				-1.8
5,834,824	-				+0.6
5,834,824	-				+0.3
5,834,824	-				-1.6
5,834,824	-				-0.6
5,834,824	-				+0.3