Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26005 and PS417_26010 are separated by 92 nucleotides PS417_26010 and PS417_26015 are separated by 58 nucleotides PS417_26015 and PS417_26020 are separated by 78 nucleotides
PS417_26005: PS417_26005 - biotin synthase, at 5,618,587 to 5,619,642
_26005
PS417_26010: PS417_26010 - amidophosphoribosyltransferase, at 5,619,735 to 5,620,472
_26010
PS417_26015: PS417_26015 - ModE family transcriptional regulator, at 5,620,531 to 5,621,295
_26015
PS417_26020: PS417_26020 - transcriptional initiation protein Tat, at 5,621,374 to 5,623,272
_26020
Position (kb) 5620
5621
5622 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5619.658 kb on + strand at 5619.658 kb on + strand at 5619.719 kb on + strand at 5619.720 kb on - strand at 5619.720 kb on - strand at 5619.978 kb on + strand, within PS417_26010 at 5619.979 kb on - strand, within PS417_26010 at 5619.979 kb on - strand, within PS417_26010 at 5620.162 kb on - strand, within PS417_26010 at 5620.162 kb on - strand, within PS417_26010 at 5620.205 kb on - strand, within PS417_26010 at 5620.363 kb on + strand, within PS417_26010 at 5620.363 kb on + strand, within PS417_26010 at 5620.438 kb on - strand at 5620.438 kb on - strand at 5620.524 kb on + strand at 5620.525 kb on - strand at 5620.617 kb on + strand, within PS417_26015 at 5620.617 kb on + strand, within PS417_26015 at 5620.618 kb on - strand, within PS417_26015 at 5620.618 kb on - strand, within PS417_26015 at 5620.618 kb on - strand, within PS417_26015 at 5620.652 kb on - strand, within PS417_26015 at 5620.652 kb on - strand, within PS417_26015 at 5620.799 kb on + strand, within PS417_26015 at 5620.799 kb on + strand, within PS417_26015 at 5620.800 kb on - strand, within PS417_26015 at 5621.007 kb on - strand, within PS417_26015 at 5621.081 kb on + strand, within PS417_26015 at 5621.186 kb on + strand, within PS417_26015 at 5621.187 kb on - strand, within PS417_26015 at 5621.238 kb on + strand at 5621.305 kb on + strand at 5621.309 kb on + strand at 5621.309 kb on + strand at 5621.310 kb on - strand at 5621.381 kb on + strand at 5621.384 kb on + strand at 5621.384 kb on + strand at 5621.385 kb on - strand at 5621.583 kb on + strand, within PS417_26020 at 5621.583 kb on + strand, within PS417_26020 at 5621.584 kb on - strand, within PS417_26020 at 5621.600 kb on - strand, within PS417_26020 at 5621.791 kb on + strand, within PS417_26020 at 5621.792 kb on - strand, within PS417_26020 at 5621.792 kb on - strand, within PS417_26020 at 5621.792 kb on - strand, within PS417_26020 at 5621.798 kb on - strand, within PS417_26020 at 5621.883 kb on - strand, within PS417_26020 at 5621.926 kb on + strand, within PS417_26020 at 5622.018 kb on + strand, within PS417_26020 at 5622.076 kb on + strand, within PS417_26020 at 5622.076 kb on + strand, within PS417_26020 at 5622.076 kb on + strand, within PS417_26020 at 5622.077 kb on - strand, within PS417_26020 at 5622.077 kb on - strand, within PS417_26020 at 5622.157 kb on + strand, within PS417_26020 at 5622.158 kb on - strand, within PS417_26020
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 5 mg/mL (C) remove 5,619,658 + -2.5 5,619,658 + +0.0 5,619,719 + -0.5 5,619,720 - +0.3 5,619,720 - +0.2 5,619,978 + PS417_26010 0.33 +1.6 5,619,979 - PS417_26010 0.33 -1.0 5,619,979 - PS417_26010 0.33 -0.1 5,620,162 - PS417_26010 0.58 -1.2 5,620,162 - PS417_26010 0.58 +0.4 5,620,205 - PS417_26010 0.64 +1.2 5,620,363 + PS417_26010 0.85 -2.0 5,620,363 + PS417_26010 0.85 +2.0 5,620,438 - +0.5 5,620,438 - +0.5 5,620,524 + -1.2 5,620,525 - +0.3 5,620,617 + PS417_26015 0.11 +1.0 5,620,617 + PS417_26015 0.11 -0.8 5,620,618 - PS417_26015 0.11 +2.0 5,620,618 - PS417_26015 0.11 +0.2 5,620,618 - PS417_26015 0.11 -0.0 5,620,652 - PS417_26015 0.16 +2.0 5,620,652 - PS417_26015 0.16 -1.3 5,620,799 + PS417_26015 0.35 -0.6 5,620,799 + PS417_26015 0.35 -2.3 5,620,800 - PS417_26015 0.35 -0.2 5,621,007 - PS417_26015 0.62 +1.0 5,621,081 + PS417_26015 0.72 +0.5 5,621,186 + PS417_26015 0.86 +1.7 5,621,187 - PS417_26015 0.86 +0.3 5,621,238 + +0.3 5,621,305 + -0.3 5,621,309 + -0.5 5,621,309 + -3.0 5,621,310 - -1.0 5,621,381 + +0.3 5,621,384 + +0.8 5,621,384 + -0.4 5,621,385 - -0.0 5,621,583 + PS417_26020 0.11 -0.6 5,621,583 + PS417_26020 0.11 -0.6 5,621,584 - PS417_26020 0.11 -0.2 5,621,600 - PS417_26020 0.12 -0.4 5,621,791 + PS417_26020 0.22 +0.4 5,621,792 - PS417_26020 0.22 +1.0 5,621,792 - PS417_26020 0.22 +0.3 5,621,792 - PS417_26020 0.22 +2.6 5,621,798 - PS417_26020 0.22 -0.0 5,621,883 - PS417_26020 0.27 +1.2 5,621,926 + PS417_26020 0.29 -0.3 5,622,018 + PS417_26020 0.34 +0.9 5,622,076 + PS417_26020 0.37 -1.0 5,622,076 + PS417_26020 0.37 -0.2 5,622,076 + PS417_26020 0.37 +0.2 5,622,077 - PS417_26020 0.37 +0.4 5,622,077 - PS417_26020 0.37 -0.3 5,622,157 + PS417_26020 0.41 -0.4 5,622,158 - PS417_26020 0.41 +0.2
Or see this region's nucleotide sequence