Strain Fitness in Pseudomonas simiae WCS417 around PS417_25740

Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 5 mg/mL (C)
5,556,320	+				-1.2
5,556,320	+				-1.2
5,556,321	-				+0.4
5,556,321	-				-0.1
5,556,321	-				-0.3
5,556,321	-				-2.8
5,556,322	+				+0.0
5,556,323	-				+1.0
5,556,353	+				-0.9
5,556,353	+				+1.0
5,556,353	+				-0.3
5,556,368	+				+2.0
5,556,368	+				-1.4
5,556,369	-				+0.0
5,556,660	-				-2.0
5,556,660	-		PS417_25740	0.26	-0.1
5,556,660	-		PS417_25740	0.26	+0.4
5,556,828	-		PS417_25740	0.40	-0.7
5,556,828	-		PS417_25740	0.40	-0.6
5,556,912	-		PS417_25740	0.48	-0.1
5,557,019	+		PS417_25740	0.57	+0.1
5,557,019	+		PS417_25740	0.57	-1.6
5,557,191	-		PS417_25740	0.72	-0.9
5,557,268	+		PS417_25740	0.79	-1.5
5,557,354	+		PS417_25740	0.86	-0.3
5,557,482	+				+1.6
5,557,506	+				+0.9
5,557,507	-				-1.0
5,557,507	-				+0.4
5,557,526	+				+0.6
5,557,552	+				-2.2
5,557,575	-				-0.3
5,557,727	+				+0.1
5,557,727	+				-0.7
5,557,731	+				+0.1
5,557,731	+				+0.1
5,557,732	-				-0.0
5,558,175	+				-1.3
5,558,176	-		PS417_25745	0.54	-2.2
5,558,413	-		PS417_25745	0.83	-0.7
5,558,512	-				+0.8
5,558,512	-				-1.0