Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_25725 and PS417_25730 are separated by 70 nucleotides PS417_25730 and PS417_25735 overlap by 4 nucleotides PS417_25735 and PS417_25740 are separated by 84 nucleotides
PS417_25725: PS417_25725 - anthranilate synthase component I, at 5,553,238 to 5,554,719
_25725
PS417_25730: PS417_25730 - phosphoglycolate phosphatase, at 5,554,790 to 5,555,608
_25730
PS417_25735: PS417_25735 - ribulose-phosphate 3-epimerase, at 5,555,605 to 5,556,279
_25735
PS417_25740: PS417_25740 - alcohol dehydrogenase, at 5,556,364 to 5,557,512
_25740
Position (kb) 5554
5555
5556 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5553.893 kb on + strand, within PS417_25725 at 5553.893 kb on + strand, within PS417_25725 at 5553.893 kb on + strand, within PS417_25725 at 5553.894 kb on - strand, within PS417_25725 at 5553.894 kb on - strand, within PS417_25725 at 5553.894 kb on - strand, within PS417_25725 at 5553.899 kb on + strand, within PS417_25725 at 5553.899 kb on + strand, within PS417_25725 at 5553.899 kb on + strand, within PS417_25725 at 5553.899 kb on + strand, within PS417_25725 at 5553.899 kb on + strand, within PS417_25725 at 5553.900 kb on - strand, within PS417_25725 at 5553.900 kb on - strand, within PS417_25725 at 5554.011 kb on + strand, within PS417_25725 at 5554.011 kb on + strand, within PS417_25725 at 5554.011 kb on + strand, within PS417_25725 at 5554.013 kb on + strand, within PS417_25725 at 5554.013 kb on + strand, within PS417_25725 at 5554.014 kb on - strand, within PS417_25725 at 5554.014 kb on - strand, within PS417_25725 at 5554.014 kb on - strand, within PS417_25725 at 5554.014 kb on - strand, within PS417_25725 at 5554.043 kb on + strand, within PS417_25725 at 5554.044 kb on - strand, within PS417_25725 at 5554.044 kb on - strand, within PS417_25725 at 5554.057 kb on - strand, within PS417_25725 at 5554.243 kb on + strand, within PS417_25725 at 5554.355 kb on + strand, within PS417_25725 at 5554.355 kb on + strand, within PS417_25725 at 5554.356 kb on - strand, within PS417_25725 at 5554.409 kb on + strand, within PS417_25725 at 5554.409 kb on + strand, within PS417_25725 at 5554.410 kb on - strand at 5554.508 kb on - strand, within PS417_25725 at 5554.597 kb on - strand at 5554.680 kb on - strand at 5554.723 kb on - strand at 5554.744 kb on + strand at 5554.755 kb on + strand at 5554.901 kb on + strand, within PS417_25730 at 5554.902 kb on - strand, within PS417_25730 at 5554.998 kb on + strand, within PS417_25730 at 5554.999 kb on - strand, within PS417_25730 at 5555.004 kb on + strand, within PS417_25730 at 5555.015 kb on + strand, within PS417_25730 at 5555.015 kb on + strand, within PS417_25730 at 5555.015 kb on + strand, within PS417_25730 at 5555.095 kb on + strand, within PS417_25730 at 5555.181 kb on + strand, within PS417_25730 at 5556.320 kb on + strand at 5556.320 kb on + strand at 5556.321 kb on - strand at 5556.321 kb on - strand at 5556.321 kb on - strand at 5556.321 kb on - strand at 5556.322 kb on + strand at 5556.323 kb on - strand at 5556.353 kb on + strand at 5556.353 kb on + strand at 5556.353 kb on + strand at 5556.368 kb on + strand at 5556.368 kb on + strand at 5556.369 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 5 mg/mL (C) remove 5,553,893 + PS417_25725 0.44 -2.2 5,553,893 + PS417_25725 0.44 -0.8 5,553,893 + PS417_25725 0.44 -1.6 5,553,894 - PS417_25725 0.44 -1.0 5,553,894 - PS417_25725 0.44 -2.2 5,553,894 - PS417_25725 0.44 -1.1 5,553,899 + PS417_25725 0.45 -0.1 5,553,899 + PS417_25725 0.45 -2.2 5,553,899 + PS417_25725 0.45 -1.8 5,553,899 + PS417_25725 0.45 -1.8 5,553,899 + PS417_25725 0.45 -1.4 5,553,900 - PS417_25725 0.45 -2.0 5,553,900 - PS417_25725 0.45 -1.3 5,554,011 + PS417_25725 0.52 -1.4 5,554,011 + PS417_25725 0.52 -1.9 5,554,011 + PS417_25725 0.52 -1.8 5,554,013 + PS417_25725 0.52 -1.7 5,554,013 + PS417_25725 0.52 -1.9 5,554,014 - PS417_25725 0.52 -1.5 5,554,014 - PS417_25725 0.52 -2.8 5,554,014 - PS417_25725 0.52 -1.5 5,554,014 - PS417_25725 0.52 -1.5 5,554,043 + PS417_25725 0.54 -2.1 5,554,044 - PS417_25725 0.54 -0.5 5,554,044 - PS417_25725 0.54 -0.8 5,554,057 - PS417_25725 0.55 -2.1 5,554,243 + PS417_25725 0.68 -0.4 5,554,355 + PS417_25725 0.75 -2.3 5,554,355 + PS417_25725 0.75 -1.5 5,554,356 - PS417_25725 0.75 -2.7 5,554,409 + PS417_25725 0.79 -3.6 5,554,409 + PS417_25725 0.79 -2.4 5,554,410 - -0.6 5,554,508 - PS417_25725 0.86 -0.7 5,554,597 - -0.9 5,554,680 - -1.0 5,554,723 - +0.1 5,554,744 + +0.2 5,554,755 + -1.4 5,554,901 + PS417_25730 0.14 -1.0 5,554,902 - PS417_25730 0.14 -0.3 5,554,998 + PS417_25730 0.25 -0.2 5,554,999 - PS417_25730 0.26 -0.6 5,555,004 + PS417_25730 0.26 +1.0 5,555,015 + PS417_25730 0.27 +1.0 5,555,015 + PS417_25730 0.27 +1.2 5,555,015 + PS417_25730 0.27 +1.0 5,555,095 + PS417_25730 0.37 +0.8 5,555,181 + PS417_25730 0.48 -0.2 5,556,320 + -1.2 5,556,320 + -1.2 5,556,321 - +0.4 5,556,321 - -0.1 5,556,321 - -0.3 5,556,321 - -2.8 5,556,322 + +0.0 5,556,323 - +1.0 5,556,353 + -0.9 5,556,353 + +1.0 5,556,353 + -0.3 5,556,368 + +2.0 5,556,368 + -1.4 5,556,369 - +0.0
Or see this region's nucleotide sequence