Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02420 and PS417_02425 are separated by 15 nucleotides PS417_02425 and PS417_02430 are separated by 57 nucleotides PS417_02430 and PS417_02435 are separated by 166 nucleotides
PS417_02420: PS417_02420 - phosphatidylserine decarboxylase, at 554,751 to 555,611
_02420
PS417_02425: PS417_02425 - thiosulfate sulfurtransferase, at 555,627 to 556,442
_02425
PS417_02430: PS417_02430 - histidine kinase, at 556,500 to 558,035
_02430
PS417_02435: PS417_02435 - flagellar motor protein MotA, at 558,202 to 559,053
_02435
Position (kb) 556
557
558
559 Strain fitness (log2 ratio) -2
-1
0
1
2 at 555.622 kb on - strand at 555.683 kb on - strand at 555.683 kb on - strand at 555.724 kb on + strand, within PS417_02425 at 555.725 kb on - strand, within PS417_02425 at 555.986 kb on - strand, within PS417_02425 at 556.115 kb on - strand, within PS417_02425 at 556.193 kb on - strand, within PS417_02425 at 556.193 kb on - strand, within PS417_02425 at 556.193 kb on - strand, within PS417_02425 at 556.557 kb on - strand at 556.775 kb on + strand, within PS417_02430 at 556.776 kb on - strand, within PS417_02430 at 556.778 kb on + strand, within PS417_02430 at 556.779 kb on - strand, within PS417_02430 at 556.779 kb on - strand, within PS417_02430 at 556.973 kb on + strand, within PS417_02430 at 557.049 kb on + strand, within PS417_02430 at 557.049 kb on + strand, within PS417_02430 at 557.049 kb on + strand, within PS417_02430 at 557.050 kb on - strand at 557.885 kb on + strand at 557.961 kb on + strand at 557.961 kb on + strand at 557.962 kb on - strand at 557.962 kb on - strand at 558.110 kb on + strand at 558.111 kb on - strand at 558.136 kb on + strand at 558.136 kb on + strand at 558.137 kb on - strand at 558.137 kb on - strand at 558.156 kb on - strand at 558.164 kb on + strand at 558.164 kb on + strand at 558.164 kb on + strand at 558.165 kb on - strand at 558.165 kb on - strand at 558.190 kb on + strand at 558.190 kb on + strand at 558.190 kb on + strand at 558.190 kb on + strand at 558.190 kb on + strand at 558.191 kb on - strand at 558.191 kb on - strand at 558.191 kb on - strand at 558.201 kb on + strand at 558.201 kb on + strand at 558.202 kb on - strand at 558.208 kb on - strand at 558.254 kb on - strand at 558.271 kb on - strand at 558.422 kb on - strand, within PS417_02435 at 558.446 kb on - strand, within PS417_02435 at 558.571 kb on + strand, within PS417_02435 at 558.571 kb on + strand, within PS417_02435 at 558.571 kb on + strand, within PS417_02435 at 558.572 kb on - strand, within PS417_02435 at 558.583 kb on + strand, within PS417_02435 at 558.583 kb on + strand, within PS417_02435 at 558.712 kb on - strand, within PS417_02435 at 558.740 kb on + strand, within PS417_02435 at 558.914 kb on - strand, within PS417_02435
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 5 mg/mL (C) remove 555,622 - +0.4 555,683 - +1.3 555,683 - +0.3 555,724 + PS417_02425 0.12 -0.0 555,725 - PS417_02425 0.12 +0.4 555,986 - PS417_02425 0.44 +0.8 556,115 - PS417_02425 0.60 +0.4 556,193 - PS417_02425 0.69 -0.4 556,193 - PS417_02425 0.69 -0.9 556,193 - PS417_02425 0.69 +0.4 556,557 - +0.3 556,775 + PS417_02430 0.18 -0.3 556,776 - PS417_02430 0.18 -2.0 556,778 + PS417_02430 0.18 -0.3 556,779 - PS417_02430 0.18 -1.3 556,779 - PS417_02430 0.18 -0.6 556,973 + PS417_02430 0.31 -0.6 557,049 + PS417_02430 0.36 -0.3 557,049 + PS417_02430 0.36 -0.0 557,049 + PS417_02430 0.36 -0.0 557,050 - -0.6 557,885 + +1.0 557,961 + -0.4 557,961 + -0.8 557,962 - -0.8 557,962 - -0.2 558,110 + -2.5 558,111 - -1.0 558,136 + +0.2 558,136 + +0.1 558,137 - +2.6 558,137 - -0.1 558,156 - -0.6 558,164 + -1.6 558,164 + +0.6 558,164 + +0.8 558,165 - +1.3 558,165 - +0.7 558,190 + -1.2 558,190 + -0.3 558,190 + -1.9 558,190 + +0.3 558,190 + +0.2 558,191 - +0.3 558,191 - -0.0 558,191 - +0.6 558,201 + +0.7 558,201 + +0.0 558,202 - +0.0 558,208 - -0.0 558,254 - +0.2 558,271 - -1.6 558,422 - PS417_02435 0.26 +1.1 558,446 - PS417_02435 0.29 +0.3 558,571 + PS417_02435 0.43 +0.8 558,571 + PS417_02435 0.43 +0.4 558,571 + PS417_02435 0.43 -0.3 558,572 - PS417_02435 0.43 -0.1 558,583 + PS417_02435 0.45 +0.4 558,583 + PS417_02435 0.45 +0.2 558,712 - PS417_02435 0.60 +0.0 558,740 + PS417_02435 0.63 +0.2 558,914 - PS417_02435 0.84 -0.3
Or see this region's nucleotide sequence