Strain Fitness in Pseudomonas simiae WCS417 around PS417_22360

Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 5 mg/mL (C)
4,842,626	+				+1.0
4,842,626	+				-0.6
4,842,881	-				+0.7
4,843,015	+				-0.1
4,843,311	+		PS417_22355	0.46	-0.7
4,843,312	-		PS417_22355	0.46	+0.1
4,843,331	+		PS417_22355	0.51	-0.5
4,843,332	-		PS417_22355	0.51	-0.2
4,843,332	-		PS417_22355	0.51	+0.2
4,843,436	-		PS417_22355	0.78	-0.2
4,843,485	-				-0.3
4,843,770	+				-1.4
4,843,770	+				-0.8
4,843,771	-				-0.2
4,843,771	-				-0.9
4,843,771	-				-0.3
4,843,789	-				-0.3
4,843,855	-		PS417_22360	0.11	-0.2
4,843,855	-		PS417_22360	0.11	+3.9
4,843,855	-		PS417_22360	0.11	-0.2
4,843,855	-		PS417_22360	0.11	+1.3
4,844,492	+		PS417_22360	0.34	-1.1
4,844,493	-		PS417_22360	0.34	+0.9
4,844,562	+		PS417_22360	0.36	-0.3
4,844,562	+		PS417_22360	0.36	-1.6
4,844,563	-		PS417_22360	0.36	-1.6
4,844,563	-		PS417_22360	0.36	-0.4
4,844,571	+		PS417_22360	0.37	+0.6
4,845,540	+				+0.3
4,845,540	+				-1.4
4,845,541	-		PS417_22360	0.71	-0.6
4,845,795	+		PS417_22360	0.80	+0.6
4,845,795	+		PS417_22360	0.80	-1.7
4,845,795	+		PS417_22360	0.80	-1.1
4,845,795	+		PS417_22360	0.80	-0.7
4,845,796	-		PS417_22360	0.80	-0.3
4,845,796	-		PS417_22360	0.80	+2.2
4,845,861	+		PS417_22360	0.82	-0.1
4,845,900	+		PS417_22360	0.83	+2.5
4,846,233	+				-0.2
4,846,233	+				-0.1
4,846,284	+				+0.4
4,846,285	-				-0.0
4,846,285	-				-1.4
4,846,362	+				-0.6
4,846,363	-				+0.8
4,846,381	+				-1.0
4,846,382	-				-0.0
4,846,390	+				-0.3
4,846,441	+				-0.4
4,846,441	+				-0.2
4,846,441	+				-1.4
4,846,441	+				-0.5
4,846,441	+				-0.7
4,846,442	-				+0.4
4,846,442	-				-1.3
4,846,495	-				-0.9
4,846,495	-				+0.1
4,846,495	-				+0.2
4,846,507	+				+0.3
4,846,508	-				+0.3
4,846,511	-				+0.4
4,846,511	-				-0.2
4,846,766	-		PS417_22365	0.17	-2.1
4,846,959	+		PS417_22365	0.31	+0.1