Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21915 and PS417_21920 overlap by 4 nucleotides PS417_21920 and PS417_21925 are separated by 106 nucleotides PS417_21925 and PS417_21930 are separated by 81 nucleotides
PS417_21915: PS417_21915 - LysR family transcriptional regulator, at 4,756,107 to 4,757,024
_21915
PS417_21920: PS417_21920 - transcriptional regulator, at 4,757,021 to 4,757,917
_21920
PS417_21925: PS417_21925 - short-chain dehydrogenase, at 4,758,024 to 4,758,782
_21925
PS417_21930: PS417_21930 - membrane protein, at 4,758,864 to 4,759,328
_21930
Position (kb)
4757
4758 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4756.101 kb on - strand at 4756.134 kb on + strand at 4756.318 kb on - strand, within PS417_21915 at 4756.420 kb on - strand, within PS417_21915 at 4756.683 kb on + strand, within PS417_21915 at 4756.684 kb on - strand, within PS417_21915 at 4756.684 kb on - strand, within PS417_21915 at 4756.975 kb on - strand at 4757.145 kb on - strand, within PS417_21920 at 4757.180 kb on + strand at 4757.339 kb on + strand, within PS417_21920 at 4757.340 kb on - strand, within PS417_21920 at 4757.340 kb on - strand, within PS417_21920 at 4757.343 kb on + strand, within PS417_21920 at 4757.343 kb on + strand, within PS417_21920 at 4757.343 kb on + strand, within PS417_21920 at 4757.343 kb on + strand, within PS417_21920 at 4757.344 kb on - strand, within PS417_21920 at 4757.344 kb on - strand, within PS417_21920 at 4757.344 kb on - strand, within PS417_21920 at 4757.395 kb on - strand, within PS417_21920 at 4757.437 kb on + strand, within PS417_21920 at 4757.620 kb on + strand, within PS417_21920 at 4757.721 kb on + strand, within PS417_21920 at 4757.721 kb on + strand, within PS417_21920 at 4757.721 kb on + strand, within PS417_21920 at 4757.721 kb on + strand, within PS417_21920 at 4757.825 kb on - strand, within PS417_21920 at 4757.982 kb on + strand at 4758.044 kb on + strand at 4758.044 kb on + strand at 4758.045 kb on - strand at 4758.124 kb on - strand, within PS417_21925 at 4758.268 kb on + strand, within PS417_21925 at 4758.268 kb on + strand, within PS417_21925 at 4758.269 kb on - strand, within PS417_21925 at 4758.446 kb on + strand, within PS417_21925 at 4758.447 kb on - strand, within PS417_21925 at 4758.447 kb on - strand, within PS417_21925 at 4758.493 kb on - strand, within PS417_21925 at 4758.894 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 5 mg/mL (C) remove 4,756,101 - +0.7 4,756,134 + -0.3 4,756,318 - PS417_21915 0.23 +0.3 4,756,420 - PS417_21915 0.34 +1.7 4,756,683 + PS417_21915 0.63 -0.1 4,756,684 - PS417_21915 0.63 -0.1 4,756,684 - PS417_21915 0.63 -0.4 4,756,975 - -4.5 4,757,145 - PS417_21920 0.14 +0.9 4,757,180 + +1.4 4,757,339 + PS417_21920 0.35 +0.0 4,757,340 - PS417_21920 0.36 -1.1 4,757,340 - PS417_21920 0.36 -0.7 4,757,343 + PS417_21920 0.36 -0.8 4,757,343 + PS417_21920 0.36 -1.1 4,757,343 + PS417_21920 0.36 -0.2 4,757,343 + PS417_21920 0.36 +0.9 4,757,344 - PS417_21920 0.36 -0.4 4,757,344 - PS417_21920 0.36 -1.1 4,757,344 - PS417_21920 0.36 -0.2 4,757,395 - PS417_21920 0.42 +0.9 4,757,437 + PS417_21920 0.46 +0.0 4,757,620 + PS417_21920 0.67 +0.0 4,757,721 + PS417_21920 0.78 +0.9 4,757,721 + PS417_21920 0.78 -1.8 4,757,721 + PS417_21920 0.78 -0.1 4,757,721 + PS417_21920 0.78 +0.1 4,757,825 - PS417_21920 0.90 -1.8 4,757,982 + -0.5 4,758,044 + +0.2 4,758,044 + +0.9 4,758,045 - -0.5 4,758,124 - PS417_21925 0.13 +0.5 4,758,268 + PS417_21925 0.32 -1.1 4,758,268 + PS417_21925 0.32 -0.3 4,758,269 - PS417_21925 0.32 -0.9 4,758,446 + PS417_21925 0.56 +0.1 4,758,447 - PS417_21925 0.56 -0.6 4,758,447 - PS417_21925 0.56 +0.3 4,758,493 - PS417_21925 0.62 -0.2 4,758,894 - -0.1
Or see this region's nucleotide sequence