Strain Fitness in Pseudomonas simiae WCS417 around PS417_16550
Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 5 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
3,615,514 | - | PS417_16545 | 0.20 | -1.2 | |
3,615,795 | - | PS417_16545 | 0.65 | -1.9 | |
3,615,795 | - | PS417_16545 | 0.65 | -0.7 | |
3,616,019 | + | -1.2 | |||
3,616,019 | + | -0.1 | |||
3,616,092 | + | -0.5 | |||
3,618,159 | + | PS417_16555 | 0.49 | +0.8 | |
3,618,213 | + | PS417_16555 | 0.53 | +0.4 | |
3,618,304 | - | PS417_16555 | 0.61 | -1.3 |
Or see this region's nucleotide sequence