Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15755 and PS417_15760 are separated by 9 nucleotides PS417_15760 and PS417_15765 overlap by 4 nucleotides PS417_15765 and PS417_15770 are separated by 83 nucleotides
PS417_15755: PS417_15755 - protease, at 3,454,751 to 3,455,746
_15755
PS417_15760: PS417_15760 - molybdenum cofactor biosynthesis protein MoaA, at 3,455,756 to 3,456,982
_15760
PS417_15765: PS417_15765 - molybdopterin biosynthesis protein B, at 3,456,979 to 3,457,533
_15765
PS417_15770: PS417_15770 - pyridoxine 5'-phosphate oxidase, at 3,457,617 to 3,458,264
_15770
Position (kb)
3455
3456
3457 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3454.909 kb on - strand, within PS417_15755 at 3455.206 kb on - strand, within PS417_15755 at 3455.206 kb on - strand, within PS417_15755 at 3455.443 kb on - strand, within PS417_15755 at 3455.563 kb on - strand, within PS417_15755 at 3455.563 kb on - strand, within PS417_15755 at 3455.563 kb on - strand, within PS417_15755 at 3455.563 kb on - strand, within PS417_15755 at 3455.563 kb on - strand, within PS417_15755 at 3455.669 kb on + strand at 3455.670 kb on - strand at 3455.673 kb on + strand at 3455.674 kb on - strand at 3455.674 kb on - strand at 3455.674 kb on - strand at 3455.805 kb on - strand at 3455.831 kb on + strand at 3456.045 kb on - strand, within PS417_15760 at 3456.372 kb on + strand, within PS417_15760 at 3456.373 kb on - strand, within PS417_15760 at 3456.373 kb on - strand, within PS417_15760 at 3456.570 kb on - strand, within PS417_15760 at 3457.321 kb on + strand, within PS417_15765 at 3457.322 kb on - strand, within PS417_15765 at 3457.322 kb on - strand, within PS417_15765 at 3457.368 kb on - strand, within PS417_15765 at 3457.390 kb on - strand, within PS417_15765 at 3457.404 kb on + strand, within PS417_15765 at 3457.404 kb on + strand, within PS417_15765 at 3457.461 kb on - strand, within PS417_15765 at 3457.594 kb on + strand at 3457.610 kb on + strand at 3457.610 kb on + strand at 3457.610 kb on + strand at 3457.611 kb on - strand at 3457.611 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 5 mg/mL (C) remove 3,454,909 - PS417_15755 0.16 +0.1 3,455,206 - PS417_15755 0.46 +0.2 3,455,206 - PS417_15755 0.46 +0.2 3,455,443 - PS417_15755 0.69 -1.5 3,455,563 - PS417_15755 0.82 -0.6 3,455,563 - PS417_15755 0.82 -0.4 3,455,563 - PS417_15755 0.82 -0.1 3,455,563 - PS417_15755 0.82 +1.8 3,455,563 - PS417_15755 0.82 -0.2 3,455,669 + +0.1 3,455,670 - +2.9 3,455,673 + +3.2 3,455,674 - -0.9 3,455,674 - -1.1 3,455,674 - +0.2 3,455,805 - +0.3 3,455,831 + -0.0 3,456,045 - PS417_15760 0.24 -0.2 3,456,372 + PS417_15760 0.50 -1.4 3,456,373 - PS417_15760 0.50 -0.0 3,456,373 - PS417_15760 0.50 +0.1 3,456,570 - PS417_15760 0.66 +0.1 3,457,321 + PS417_15765 0.62 +1.2 3,457,322 - PS417_15765 0.62 -0.1 3,457,322 - PS417_15765 0.62 -0.7 3,457,368 - PS417_15765 0.70 +0.4 3,457,390 - PS417_15765 0.74 -0.4 3,457,404 + PS417_15765 0.77 +0.9 3,457,404 + PS417_15765 0.77 +0.0 3,457,461 - PS417_15765 0.87 -1.4 3,457,594 + -1.3 3,457,610 + +0.1 3,457,610 + +0.4 3,457,610 + -1.2 3,457,611 - -0.3 3,457,611 - -0.5
Or see this region's nucleotide sequence