Strain Fitness in Pseudomonas simiae WCS417 around PS417_14975
Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 5 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
3,273,004 | + | PS417_14970 | 0.32 | -0.2 | |
3,273,005 | - | PS417_14970 | 0.32 | +0.5 | |
3,273,023 | - | PS417_14970 | 0.34 | +0.1 | |
3,273,373 | + | PS417_14970 | 0.63 | -0.3 | |
3,273,373 | + | PS417_14970 | 0.63 | -2.4 | |
3,273,373 | + | PS417_14970 | 0.63 | +0.2 | |
3,273,373 | + | PS417_14970 | 0.63 | +0.9 | |
3,273,373 | + | PS417_14970 | 0.63 | +1.8 | |
3,273,373 | + | PS417_14970 | 0.63 | -0.2 | |
3,273,374 | - | PS417_14970 | 0.63 | -0.6 | |
3,273,374 | - | PS417_14970 | 0.63 | -0.2 | |
3,273,472 | + | PS417_14970 | 0.71 | +0.1 | |
3,273,521 | + | PS417_14970 | 0.75 | -0.8 | |
3,273,522 | - | PS417_14970 | 0.75 | -0.0 | |
3,273,527 | + | PS417_14970 | 0.76 | -1.0 | |
3,273,527 | + | PS417_14970 | 0.76 | +1.0 | |
3,273,529 | + | PS417_14970 | 0.76 | +0.1 | |
3,273,530 | - | PS417_14970 | 0.76 | -0.3 | |
3,273,714 | + | +0.1 | |||
3,273,893 | + | PS417_14975 | 0.20 | -1.1 | |
3,273,908 | + | PS417_14975 | 0.22 | +0.0 | |
3,274,097 | + | PS417_14975 | 0.53 | -1.2 | |
3,274,223 | + | PS417_14975 | 0.74 | -1.2 | |
3,274,223 | + | PS417_14975 | 0.74 | -1.4 | |
3,274,416 | + | -1.4 | |||
3,274,489 | + | -0.0 | |||
3,274,489 | + | +0.7 | |||
3,274,490 | - | -0.4 | |||
3,274,879 | + | PS417_14980 | 0.41 | -0.8 |
Or see this region's nucleotide sequence