Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_11595 and PS417_11600 are separated by 163 nucleotides PS417_11600 and PS417_11605 are separated by 10 nucleotides
PS417_11595: PS417_11595 - ABC transporter substrate-binding protein, at 2,493,959 to 2,495,197
_11595
PS417_11600: PS417_11600 - urea ABC transporter permease, at 2,495,361 to 2,496,278
_11600
PS417_11605: PS417_11605 - urea ABC transporter permease, at 2,496,289 to 2,497,452
_11605
Position (kb)
2495
2496
2497 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2494.392 kb on - strand, within PS417_11595 at 2494.406 kb on + strand, within PS417_11595 at 2494.407 kb on - strand, within PS417_11595 at 2494.439 kb on + strand at 2494.517 kb on + strand, within PS417_11595 at 2494.518 kb on - strand, within PS417_11595 at 2494.535 kb on + strand, within PS417_11595 at 2494.535 kb on + strand, within PS417_11595 at 2494.850 kb on + strand, within PS417_11595 at 2494.911 kb on - strand, within PS417_11595 at 2495.147 kb on + strand at 2495.147 kb on + strand at 2495.147 kb on + strand at 2495.218 kb on + strand at 2495.532 kb on + strand, within PS417_11600 at 2495.532 kb on + strand, within PS417_11600 at 2495.533 kb on - strand, within PS417_11600 at 2495.580 kb on + strand, within PS417_11600 at 2495.667 kb on + strand, within PS417_11600 at 2495.668 kb on - strand, within PS417_11600 at 2495.668 kb on - strand, within PS417_11600 at 2496.070 kb on - strand, within PS417_11600 at 2496.203 kb on - strand at 2496.277 kb on - strand at 2496.424 kb on + strand at 2496.424 kb on + strand, within PS417_11605 at 2496.424 kb on + strand, within PS417_11605 at 2496.425 kb on - strand, within PS417_11605 at 2496.745 kb on + strand, within PS417_11605 at 2496.746 kb on - strand, within PS417_11605 at 2496.746 kb on - strand, within PS417_11605 at 2496.895 kb on + strand, within PS417_11605 at 2497.111 kb on - strand, within PS417_11605 at 2497.201 kb on + strand, within PS417_11605 at 2497.201 kb on + strand, within PS417_11605 at 2497.202 kb on - strand, within PS417_11605 at 2497.234 kb on + strand, within PS417_11605
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 5 mg/mL (C) remove 2,494,392 - PS417_11595 0.35 -0.2 2,494,406 + PS417_11595 0.36 -1.0 2,494,407 - PS417_11595 0.36 -0.0 2,494,439 + +0.8 2,494,517 + PS417_11595 0.45 -0.9 2,494,518 - PS417_11595 0.45 +0.2 2,494,535 + PS417_11595 0.46 -0.3 2,494,535 + PS417_11595 0.46 +0.0 2,494,850 + PS417_11595 0.72 +0.3 2,494,911 - PS417_11595 0.77 +0.2 2,495,147 + +0.7 2,495,147 + +0.7 2,495,147 + +2.0 2,495,218 + -0.1 2,495,532 + PS417_11600 0.19 -0.1 2,495,532 + PS417_11600 0.19 -1.3 2,495,533 - PS417_11600 0.19 +0.2 2,495,580 + PS417_11600 0.24 -0.8 2,495,667 + PS417_11600 0.33 -0.1 2,495,668 - PS417_11600 0.33 -1.6 2,495,668 - PS417_11600 0.33 -0.5 2,496,070 - PS417_11600 0.77 -0.3 2,496,203 - +0.2 2,496,277 - +0.4 2,496,424 + -2.3 2,496,424 + PS417_11605 0.12 +0.7 2,496,424 + PS417_11605 0.12 -0.3 2,496,425 - PS417_11605 0.12 +0.5 2,496,745 + PS417_11605 0.39 +0.7 2,496,746 - PS417_11605 0.39 +0.2 2,496,746 - PS417_11605 0.39 -0.5 2,496,895 + PS417_11605 0.52 +0.3 2,497,111 - PS417_11605 0.71 -0.8 2,497,201 + PS417_11605 0.78 -0.0 2,497,201 + PS417_11605 0.78 +0.2 2,497,202 - PS417_11605 0.78 +0.7 2,497,234 + PS417_11605 0.81 +0.9
Or see this region's nucleotide sequence