Strain Fitness in Pseudomonas simiae WCS417 around PS417_11150
Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 5 mg/mL (C) |
|---|---|---|---|---|---|
| remove | |||||
| 2,390,166 | - | PS417_11145 | 0.87 | -0.6 | |
| 2,390,382 | - | +1.2 | |||
| 2,390,454 | + | +1.5 | |||
| 2,390,621 | + | -0.5 | |||
| 2,390,622 | - | +1.2 | |||
| 2,390,840 | + | PS417_11150 | 0.27 | +0.0 | |
| 2,391,114 | - | PS417_11150 | 0.48 | -1.3 | |
| 2,391,191 | + | PS417_11150 | 0.54 | -0.5 | |
| 2,391,218 | + | PS417_11150 | 0.56 | -1.0 | |
| 2,391,218 | + | PS417_11150 | 0.56 | -0.8 | |
| 2,391,219 | - | PS417_11150 | 0.56 | +0.1 | |
| 2,391,428 | - | PS417_11150 | 0.73 | -0.5 | |
| 2,391,431 | + | PS417_11150 | 0.73 | -2.5 | |
| 2,391,431 | + | PS417_11150 | 0.73 | +0.3 | |
| 2,391,431 | + | PS417_11150 | 0.73 | -0.3 | |
| 2,391,431 | + | PS417_11150 | 0.73 | -0.6 | |
| 2,391,448 | + | PS417_11150 | 0.74 | +0.1 | |
| 2,391,453 | - | PS417_11150 | 0.75 | -0.1 | |
| 2,391,519 | - | PS417_11150 | 0.80 | -0.0 | |
| 2,391,650 | + | -1.3 | |||
| 2,391,716 | - | -0.4 | |||
| 2,391,719 | + | -1.3 | |||
| 2,391,719 | + | -0.3 | |||
| 2,391,720 | - | +0.4 | |||
| 2,391,844 | + | -0.1 | |||
| 2,391,845 | - | -0.3 | |||
| 2,391,845 | - | -0.8 | |||
| 2,391,880 | - | +0.7 | |||
| 2,392,673 | + | PS417_11155 | 0.82 | -1.8 |
Or see this region's nucleotide sequence