Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_10805 and PS417_10810 are separated by 157 nucleotides PS417_10810 and PS417_10815 are separated by 298 nucleotides PS417_10815 and PS417_10820 overlap by 4 nucleotides
PS417_10805: PS417_10805 - chemotaxis protein CheY, at 2,308,680 to 2,310,905
_10805
PS417_10810: PS417_10810 - hypothetical protein, at 2,311,063 to 2,311,332
_10810
PS417_10815: PS417_10815 - TetR family transcriptional regulator, at 2,311,631 to 2,312,302
_10815
PS417_10820: PS417_10820 - N-methylproline demethylase, at 2,312,299 to 2,314,335
_10820
Position (kb)
2311
2312 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 2310.070 kb on + strand, within PS417_10805 at 2310.071 kb on - strand at 2310.423 kb on + strand, within PS417_10805 at 2310.454 kb on + strand, within PS417_10805 at 2310.926 kb on + strand at 2310.947 kb on + strand at 2311.005 kb on + strand at 2311.005 kb on + strand at 2311.107 kb on + strand, within PS417_10810 at 2311.107 kb on + strand at 2311.108 kb on - strand, within PS417_10810 at 2311.259 kb on + strand, within PS417_10810 at 2311.340 kb on - strand at 2311.457 kb on - strand at 2311.550 kb on + strand at 2311.550 kb on + strand at 2311.560 kb on + strand at 2311.560 kb on + strand at 2311.561 kb on - strand at 2311.592 kb on + strand at 2311.593 kb on - strand at 2311.904 kb on - strand, within PS417_10815 at 2312.120 kb on + strand, within PS417_10815 at 2312.120 kb on + strand, within PS417_10815 at 2312.121 kb on - strand, within PS417_10815 at 2312.140 kb on + strand, within PS417_10815 at 2312.331 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 5 mg/mL (C) remove 2,310,070 + PS417_10805 0.62 +0.7 2,310,071 - +3.3 2,310,423 + PS417_10805 0.78 -0.2 2,310,454 + PS417_10805 0.80 -0.0 2,310,926 + -0.8 2,310,947 + +1.4 2,311,005 + -0.6 2,311,005 + +0.5 2,311,107 + PS417_10810 0.16 -1.0 2,311,107 + +1.0 2,311,108 - PS417_10810 0.17 -0.6 2,311,259 + PS417_10810 0.73 -0.5 2,311,340 - +0.7 2,311,457 - +0.6 2,311,550 + -0.5 2,311,550 + +2.8 2,311,560 + +0.3 2,311,560 + +1.4 2,311,561 - -0.7 2,311,592 + +0.7 2,311,593 - +0.5 2,311,904 - PS417_10815 0.41 +0.5 2,312,120 + PS417_10815 0.73 -0.4 2,312,120 + PS417_10815 0.73 -1.1 2,312,121 - PS417_10815 0.73 +0.4 2,312,140 + PS417_10815 0.76 +3.9 2,312,331 - +0.2
Or see this region's nucleotide sequence