Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_09690 and PS417_09695 are separated by 253 nucleotides PS417_09695 and PS417_09700 are separated by 442 nucleotides
PS417_09690: PS417_09690 - sugar dehydrogenase, at 2,101,237 to 2,102,037
_09690
PS417_09695: PS417_09695 - hydrolase, at 2,102,291 to 2,103,013
_09695
PS417_09700: PS417_09700 - transaldolase, at 2,103,456 to 2,104,262
_09700
Position (kb)
2102
2103
2104 Strain fitness (log2 ratio)
-1
0
1 at 2101.308 kb on - strand at 2101.544 kb on + strand, within PS417_09690 at 2101.926 kb on - strand, within PS417_09690 at 2101.926 kb on - strand, within PS417_09690 at 2101.926 kb on - strand, within PS417_09690 at 2102.012 kb on - strand at 2102.280 kb on - strand at 2102.347 kb on - strand at 2102.360 kb on - strand at 2102.564 kb on - strand, within PS417_09695 at 2102.564 kb on - strand, within PS417_09695 at 2102.715 kb on + strand, within PS417_09695 at 2102.994 kb on + strand at 2103.016 kb on + strand at 2103.017 kb on - strand at 2103.172 kb on - strand at 2103.172 kb on - strand at 2103.174 kb on - strand at 2103.175 kb on + strand at 2103.175 kb on + strand at 2103.175 kb on + strand at 2103.176 kb on - strand at 2103.176 kb on - strand at 2103.276 kb on + strand at 2103.276 kb on + strand at 2103.276 kb on + strand at 2103.277 kb on - strand at 2103.277 kb on - strand at 2103.337 kb on - strand at 2103.337 kb on - strand at 2103.446 kb on + strand at 2103.681 kb on + strand, within PS417_09700 at 2103.799 kb on - strand at 2103.799 kb on - strand, within PS417_09700 at 2103.862 kb on + strand, within PS417_09700 at 2103.863 kb on - strand, within PS417_09700 at 2103.863 kb on - strand, within PS417_09700 at 2104.001 kb on - strand, within PS417_09700
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 5 mg/mL (C) remove 2,101,308 - +1.2 2,101,544 + PS417_09690 0.38 -0.4 2,101,926 - PS417_09690 0.86 -0.4 2,101,926 - PS417_09690 0.86 +0.1 2,101,926 - PS417_09690 0.86 +0.0 2,102,012 - +0.5 2,102,280 - +0.1 2,102,347 - -0.9 2,102,360 - -0.3 2,102,564 - PS417_09695 0.38 -1.3 2,102,564 - PS417_09695 0.38 -0.9 2,102,715 + PS417_09695 0.59 -1.3 2,102,994 + +0.5 2,103,016 + -0.1 2,103,017 - -1.1 2,103,172 - +0.4 2,103,172 - -0.3 2,103,174 - -0.4 2,103,175 + +0.5 2,103,175 + -0.0 2,103,175 + -0.5 2,103,176 - -0.9 2,103,176 - -0.9 2,103,276 + +0.5 2,103,276 + -0.2 2,103,276 + -0.9 2,103,277 - -0.4 2,103,277 - -0.5 2,103,337 - +0.5 2,103,337 - -0.3 2,103,446 + -0.3 2,103,681 + PS417_09700 0.28 -0.5 2,103,799 - +0.4 2,103,799 - PS417_09700 0.43 +0.8 2,103,862 + PS417_09700 0.50 -0.1 2,103,863 - PS417_09700 0.50 -0.4 2,103,863 - PS417_09700 0.50 -0.5 2,104,001 - PS417_09700 0.68 -0.6
Or see this region's nucleotide sequence