Strain Fitness in Pseudomonas simiae WCS417 around PS417_08055

Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 5 mg/mL (C)
1,761,810	+		PS417_08050	0.32	-0.4
1,761,933	+		PS417_08050	0.45	-1.5
1,761,934	-		PS417_08050	0.45	-0.3
1,762,305	+		PS417_08050	0.85	+1.1
1,762,305	+		PS417_08050	0.85	+0.1
1,762,306	-		PS417_08050	0.85	-0.3
1,762,306	-		PS417_08050	0.85	-0.3
1,762,395	+				-1.8
1,762,505	-				+3.4
1,762,505	-				+0.6
1,762,509	-				-0.8
1,762,509	-				-0.1
1,762,509	-				-0.5
1,762,545	+				-0.3
1,762,742	-		PS417_08055	0.27	-0.6
1,762,864	-		PS417_08055	0.43	-0.0
1,762,945	+		PS417_08055	0.53	-0.2
1,762,946	-		PS417_08055	0.54	-1.2
1,762,946	-		PS417_08055	0.54	-0.5
1,762,946	-		PS417_08055	0.54	+1.8
1,763,011	+		PS417_08055	0.62	-0.6
1,763,011	+		PS417_08055	0.62	+0.2
1,763,011	+		PS417_08055	0.62	-2.2
1,763,019	+		PS417_08055	0.63	+0.6
1,763,020	-				+0.8
1,763,072	-		PS417_08055	0.70	-1.1
1,763,115	-		PS417_08055	0.76	-2.3
1,763,179	+		PS417_08055	0.84	+0.1
1,763,179	+		PS417_08055	0.84	-0.2
1,763,180	-		PS417_08055	0.84	-0.0
1,763,180	-		PS417_08055	0.84	-0.5
1,763,180	-		PS417_08055	0.84	-1.1
1,763,180	-		PS417_08055	0.84	-0.6
1,763,186	-		PS417_08055	0.85	-1.1
1,763,186	-		PS417_08055	0.85	-0.2
1,763,228	+				-0.8
1,763,228	+				+0.0
1,763,228	+				-0.2
1,763,228	+				-0.3
1,763,228	+				-0.5
1,763,229	-				-0.1
1,763,229	-				-0.2
1,763,229	-				+0.3
1,763,229	-				-0.2
1,763,229	-				-0.1
1,763,278	-				-1.8
1,763,345	-				+1.8
1,763,384	+				-0.3
1,763,396	+				-0.4
1,763,419	+				-0.0
1,763,419	+				+0.2
1,763,419	+				+0.3
1,763,420	-				+3.0
1,763,420	-				+0.0
1,763,420	-				-1.4
1,763,420	-				+0.5
1,763,423	+				+0.7
1,763,423	+				-0.3
1,763,424	-				-0.3
1,763,424	-				+0.1
1,763,479	+				+0.9
1,763,479	+				-0.2
1,763,479	+				+0.1
1,763,479	+				+0.2
1,763,479	+				-1.2
1,763,479	+				-0.1
1,763,479	+				-1.2
1,763,480	-				+0.1
1,763,480	-				-0.4
1,763,480	-				+0.0
1,763,480	-				-0.5
1,763,480	-				+0.3
1,763,514	+				+0.4
1,763,515	-				+0.2
1,763,515	-				-0.5
1,763,550	+				-2.5
1,763,736	+		PS417_08060	0.28	-0.1
1,763,737	-		PS417_08060	0.28	+0.5
1,763,876	+		PS417_08060	0.44	-0.8
1,763,876	+		PS417_08060	0.44	-0.0
1,763,876	+		PS417_08060	0.44	+0.4
1,763,877	-		PS417_08060	0.44	+1.0
1,763,948	-		PS417_08060	0.52	+2.0
1,764,024	+		PS417_08060	0.61	+0.8
1,764,024	+		PS417_08060	0.61	+0.8
1,764,100	-		PS417_08060	0.69	+0.3
1,764,132	+		PS417_08060	0.73	-0.5
1,764,133	-		PS417_08060	0.73	+2.1
1,764,300	-				-0.1