Strain Fitness in Pseudomonas simiae WCS417 around PS417_05875

Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 5 mg/mL (C)
1,303,259	+				+1.6
1,303,260	-				-1.5
1,303,276	+				+0.1
1,303,276	+				+1.3
1,303,277	-				-0.3
1,303,277	-				+1.2
1,303,310	-				+0.7
1,303,576	+		PS417_05870	0.31	-1.9
1,303,577	-				-1.1
1,303,577	-		PS417_05870	0.31	-0.6
1,303,642	+		PS417_05870	0.40	-0.5
1,303,642	+		PS417_05870	0.40	-0.8
1,303,642	+		PS417_05870	0.40	+1.6
1,303,642	+		PS417_05870	0.40	-0.9
1,303,642	+		PS417_05870	0.40	-1.7
1,303,643	-		PS417_05870	0.40	+0.2
1,303,848	+		PS417_05870	0.69	-0.0
1,304,055	+				+2.2
1,304,098	+				+0.0
1,304,098	+				+0.2
1,304,098	+				+0.4
1,304,098	+				+1.5
1,304,098	+				-0.8
1,304,098	+				+0.0
1,304,099	-				-0.1
1,304,103	+				-1.0
1,304,103	+				-0.2
1,304,104	-				-0.6
1,304,233	+				+2.7
1,304,233	+				-0.6
1,304,234	-				-0.3
1,304,307	+		PS417_05875	0.24	-0.7
1,304,308	-		PS417_05875	0.24	-1.3
1,304,308	-		PS417_05875	0.24	-0.4
1,304,362	+		PS417_05875	0.35	+0.0
1,304,363	-		PS417_05875	0.36	-2.7
1,304,363	-		PS417_05875	0.36	-0.5
1,304,363	-		PS417_05875	0.36	-0.5
1,304,546	+		PS417_05875	0.75	-2.1
1,304,556	+		PS417_05875	0.77	-0.4
1,304,556	+		PS417_05875	0.77	+2.1
1,304,556	+		PS417_05875	0.77	-1.1
1,304,556	+		PS417_05875	0.77	-0.4
1,304,557	-		PS417_05875	0.77	+0.3
1,304,749	+				-1.6
1,304,749	+				+0.1
1,304,792	-				-0.8
1,305,142	+		PS417_05880	0.28	-0.6
1,305,143	-		PS417_05880	0.28	+2.1
1,305,143	-		PS417_05880	0.28	+1.3
1,305,380	-		PS417_05880	0.46	+0.2
1,305,385	+		PS417_05880	0.46	+1.5
1,305,385	+		PS417_05880	0.46	-0.3
1,305,385	+		PS417_05880	0.46	-1.9
1,305,386	-		PS417_05880	0.46	-0.1
1,305,386	-		PS417_05880	0.46	-0.3
1,305,386	-		PS417_05880	0.46	+3.2
1,305,573	+		PS417_05880	0.60	-1.0