Strain Fitness in Pseudomonas simiae WCS417 around PS417_28160

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
6,076,594	+		PS417_28155	0.20	-0.1
6,076,676	+		PS417_28155	0.27	-0.5
6,076,677	-		PS417_28155	0.27	-0.4
6,076,741	-				+0.5
6,076,756	+		PS417_28155	0.35	+0.2
6,076,757	-		PS417_28155	0.35	-0.9
6,076,757	-		PS417_28155	0.35	+0.0
6,076,762	+		PS417_28155	0.35	+0.5
6,076,763	-		PS417_28155	0.35	-0.2
6,076,870	-		PS417_28155	0.45	-0.3
6,076,956	+		PS417_28155	0.53	-0.8
6,076,976	-		PS417_28155	0.55	+1.6
6,077,014	+		PS417_28155	0.58	-3.1
6,077,015	-		PS417_28155	0.58	+1.4
6,077,023	+		PS417_28155	0.59	+0.0
6,077,024	-		PS417_28155	0.59	+0.8
6,077,041	+		PS417_28155	0.61	+0.9
6,077,042	-		PS417_28155	0.61	+0.6
6,077,042	-		PS417_28155	0.61	+0.1
6,077,042	-		PS417_28155	0.61	-0.5
6,077,147	+		PS417_28155	0.70	+0.6
6,077,148	-		PS417_28155	0.71	+0.8
6,077,148	-		PS417_28155	0.71	-0.3
6,077,148	-		PS417_28155	0.71	-0.4
6,077,148	-		PS417_28155	0.71	+0.3
6,077,152	-		PS417_28155	0.71	+0.2
6,077,152	-		PS417_28155	0.71	-0.5
6,077,152	-		PS417_28155	0.71	+0.1
6,077,233	+		PS417_28155	0.78	+0.1
6,077,248	+		PS417_28155	0.80	+0.3
6,077,249	-		PS417_28155	0.80	-0.3
6,077,249	-				+0.5
6,077,393	-				+1.1
6,077,393	-				+0.6
6,077,393	-				-0.5
6,077,393	-				+0.1
6,077,395	-				+0.3
6,077,400	+				+0.1
6,077,401	-				-1.0
6,077,593	+				-1.2
6,077,671	-				-0.2
6,077,847	+				-2.5
6,078,135	+		PS417_28160	0.13	-0.9
6,078,136	-		PS417_28160	0.13	-0.8
6,078,136	-		PS417_28160	0.13	+0.2
6,078,136	-		PS417_28160	0.13	-0.0
6,078,136	-		PS417_28160	0.13	-0.8
6,078,151	-		PS417_28160	0.13	+0.4
6,078,151	-		PS417_28160	0.13	+0.4
6,078,249	-		PS417_28160	0.15	-0.5
6,078,413	-		PS417_28160	0.19	+0.5
6,078,413	-		PS417_28160	0.19	-0.1
6,078,600	+		PS417_28160	0.23	-0.5
6,078,601	-		PS417_28160	0.23	-0.0
6,078,707	+		PS417_28160	0.25	+0.1
6,078,707	+		PS417_28160	0.25	-1.3
6,078,708	-		PS417_28160	0.25	+1.5
6,078,760	+		PS417_28160	0.26	+0.7
6,078,760	+		PS417_28160	0.26	-0.2
6,078,773	+				-0.9
6,078,897	+		PS417_28160	0.29	+0.1
6,078,900	-		PS417_28160	0.29	+0.2
6,078,939	+		PS417_28160	0.30	-1.0
6,079,048	-		PS417_28160	0.32	+0.1
6,079,048	-		PS417_28160	0.32	-0.9
6,079,048	-		PS417_28160	0.32	+1.2
6,079,048	-		PS417_28160	0.32	-0.0
6,079,061	-		PS417_28160	0.33	+1.4
6,079,073	-		PS417_28160	0.33	-0.2
6,079,330	+		PS417_28160	0.39	-0.0
6,079,330	+		PS417_28160	0.39	-1.7
6,079,330	+		PS417_28160	0.39	+0.3
6,079,331	-		PS417_28160	0.39	-0.9
6,079,331	-		PS417_28160	0.39	+0.1
6,079,331	-		PS417_28160	0.39	+0.5
6,079,368	+		PS417_28160	0.39	-0.2
6,079,368	+		PS417_28160	0.39	+0.7
6,079,369	-				+1.1
6,079,520	-		PS417_28160	0.43	+0.1
6,079,520	-		PS417_28160	0.43	+0.2
6,079,569	+		PS417_28160	0.44	+1.6
6,079,570	-		PS417_28160	0.44	+4.4
6,079,570	-		PS417_28160	0.44	+1.8
6,079,796	+		PS417_28160	0.49	-0.4
6,079,797	-		PS417_28160	0.49	+0.0
6,079,861	+		PS417_28160	0.50	-0.0
6,079,861	+		PS417_28160	0.50	-0.9
6,079,862	-		PS417_28160	0.50	-0.3
6,079,862	-		PS417_28160	0.50	+2.1
6,079,964	+		PS417_28160	0.52	+2.0
6,079,978	+		PS417_28160	0.53	-0.0
6,080,093	-		PS417_28160	0.55	+0.1
6,080,105	+				-0.5
6,080,105	+		PS417_28160	0.56	-0.2
6,080,105	+		PS417_28160	0.56	-1.3
6,080,105	+		PS417_28160	0.56	+0.1
6,080,105	+		PS417_28160	0.56	+0.8
6,080,105	+		PS417_28160	0.56	-0.1
6,080,105	+		PS417_28160	0.56	-0.7
6,080,105	+		PS417_28160	0.56	-0.1
6,080,105	+		PS417_28160	0.56	-0.7
6,080,105	+		PS417_28160	0.56	-0.1
6,080,105	+		PS417_28160	0.56	+0.3
6,080,106	-		PS417_28160	0.56	+0.3
6,080,106	-		PS417_28160	0.56	+1.0
6,080,133	+		PS417_28160	0.56	+0.5
6,080,210	-		PS417_28160	0.58	+0.3
6,080,371	+		PS417_28160	0.61	+1.7
6,080,372	-		PS417_28160	0.61	-0.2
6,080,372	-		PS417_28160	0.61	-2.6
6,080,372	-		PS417_28160	0.61	+0.1
6,080,372	-		PS417_28160	0.61	+0.1
6,080,372	-		PS417_28160	0.61	+1.4
6,080,390	-		PS417_28160	0.62	-0.9
6,080,390	-		PS417_28160	0.62	+0.2
6,080,390	-		PS417_28160	0.62	-0.1
6,080,546	+		PS417_28160	0.65	+1.1
6,080,581	-				+0.5
6,080,617	+		PS417_28160	0.67	+0.1
6,080,617	+		PS417_28160	0.67	-0.1
6,080,618	-		PS417_28160	0.67	-0.3
6,080,640	+				-0.1
6,080,640	+		PS417_28160	0.67	+0.1
6,080,640	+		PS417_28160	0.67	+1.0
6,080,641	-		PS417_28160	0.67	+1.8
6,080,641	-		PS417_28160	0.67	+1.1
6,080,641	-		PS417_28160	0.67	+0.0
6,080,641	-		PS417_28160	0.67	+0.2
6,080,641	-		PS417_28160	0.67	+1.8
6,080,641	-		PS417_28160	0.67	+0.6
6,080,717	+		PS417_28160	0.69	+0.9
6,080,718	-		PS417_28160	0.69	+1.8
6,080,726	+		PS417_28160	0.69	+0.6
6,080,727	-		PS417_28160	0.69	+0.1
6,080,748	+		PS417_28160	0.70	+2.0
6,080,748	+		PS417_28160	0.70	+1.2
6,080,749	-		PS417_28160	0.70	-0.9
6,080,749	-		PS417_28160	0.70	-0.2
6,080,749	-		PS417_28160	0.70	+0.4
6,080,784	+		PS417_28160	0.70	-2.2
6,080,785	-		PS417_28160	0.70	+3.9
6,080,855	+		PS417_28160	0.72	+0.5
6,080,855	+		PS417_28160	0.72	+0.1
6,081,290	+		PS417_28160	0.81	+1.5
6,081,290	+		PS417_28160	0.81	-0.9
6,081,290	+		PS417_28160	0.81	+0.2
6,081,291	-		PS417_28160	0.81	-0.3
6,081,291	-		PS417_28160	0.81	+0.1
6,081,291	-		PS417_28160	0.81	-0.0
6,081,291	-		PS417_28160	0.81	+0.5
6,081,295	-		PS417_28160	0.82	+2.1
6,081,295	-		PS417_28160	0.82	+0.5
6,081,543	-		PS417_28160	0.87	+0.1
6,081,543	-		PS417_28160	0.87	-0.4
6,081,814	+				-0.7
6,081,815	-				+0.6
6,081,891	+				+0.4
6,081,891	+				+2.4
6,081,891	+				+0.2
6,081,987	+				-0.3
6,081,988	-				-0.3
6,081,988	-				+0.0
6,082,260	+				+0.3
6,082,261	-				+0.5
6,082,348	+		PS417_28165	0.14	+0.1
6,082,348	+		PS417_28165	0.14	+0.2
6,082,349	-		PS417_28165	0.14	+0.1
6,082,533	-		PS417_28165	0.26	+0.3
6,082,638	+		PS417_28165	0.33	-0.8
6,082,638	+		PS417_28165	0.33	+0.2
6,082,639	-		PS417_28165	0.33	-1.2
6,082,639	-		PS417_28165	0.33	-2.5
6,082,639	-		PS417_28165	0.33	-0.6
6,082,803	+		PS417_28165	0.43	-0.3
6,083,072	+		PS417_28165	0.61	-1.2
6,083,073	-		PS417_28165	0.61	-0.5
6,083,073	-		PS417_28165	0.61	+0.5
6,083,073	-		PS417_28165	0.61	-1.9
6,083,073	-		PS417_28165	0.61	-0.4
6,083,076	+		PS417_28165	0.61	-0.1