Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_25045 and PS417_25055 are separated by 717 nucleotides
PS417_25045: PS417_25045 - hypothetical protein, at 5,431,285 to 5,431,584
_25045
PS417_25055: PS417_25055 - transposase, at 5,432,302 to 5,432,499
_25055
Position (kb) 5432
5433 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5431.373 kb on + strand, within PS417_25045 at 5431.373 kb on + strand, within PS417_25045 at 5431.373 kb on + strand, within PS417_25045 at 5431.373 kb on + strand, within PS417_25045 at 5431.374 kb on - strand, within PS417_25045 at 5431.374 kb on - strand, within PS417_25045 at 5431.374 kb on - strand, within PS417_25045 at 5431.375 kb on + strand, within PS417_25045 at 5431.375 kb on + strand, within PS417_25045 at 5431.470 kb on + strand, within PS417_25045 at 5431.470 kb on + strand, within PS417_25045 at 5431.471 kb on - strand, within PS417_25045 at 5431.471 kb on - strand, within PS417_25045 at 5431.485 kb on + strand, within PS417_25045 at 5431.486 kb on - strand, within PS417_25045 at 5431.486 kb on - strand, within PS417_25045 at 5431.525 kb on + strand, within PS417_25045 at 5431.526 kb on - strand, within PS417_25045 at 5431.526 kb on - strand, within PS417_25045 at 5431.559 kb on + strand at 5431.559 kb on + strand at 5431.611 kb on + strand at 5431.612 kb on - strand at 5431.628 kb on + strand at 5431.628 kb on + strand at 5431.629 kb on - strand at 5431.629 kb on - strand at 5431.697 kb on + strand at 5431.697 kb on + strand at 5431.698 kb on - strand at 5431.698 kb on - strand at 5431.775 kb on + strand at 5431.838 kb on + strand at 5431.867 kb on - strand at 5431.951 kb on - strand at 5431.951 kb on - strand at 5431.967 kb on + strand at 5431.967 kb on + strand at 5431.980 kb on + strand at 5431.980 kb on + strand at 5432.102 kb on + strand at 5432.234 kb on + strand at 5432.234 kb on + strand at 5432.235 kb on - strand at 5432.257 kb on + strand at 5432.257 kb on + strand at 5432.264 kb on + strand at 5432.264 kb on + strand at 5432.356 kb on - strand, within PS417_25055 at 5432.399 kb on + strand, within PS417_25055 at 5432.400 kb on - strand, within PS417_25055 at 5432.400 kb on - strand, within PS417_25055 at 5432.408 kb on + strand, within PS417_25055 at 5432.408 kb on + strand, within PS417_25055 at 5432.483 kb on + strand at 5432.483 kb on + strand at 5432.489 kb on - strand at 5432.547 kb on + strand at 5432.593 kb on - strand at 5432.600 kb on + strand at 5432.601 kb on - strand at 5432.722 kb on + strand at 5432.722 kb on + strand at 5432.723 kb on - strand at 5432.723 kb on - strand at 5432.824 kb on - strand at 5432.831 kb on - strand at 5432.836 kb on + strand at 5432.836 kb on + strand at 5432.836 kb on + strand at 5432.836 kb on + strand at 5432.837 kb on - strand at 5432.838 kb on + strand at 5432.838 kb on + strand at 5432.838 kb on + strand at 5432.838 kb on + strand at 5432.839 kb on - strand at 5432.929 kb on + strand at 5433.040 kb on - strand at 5433.040 kb on - strand at 5433.040 kb on - strand at 5433.057 kb on + strand at 5433.225 kb on + strand at 5433.225 kb on + strand at 5433.290 kb on + strand at 5433.290 kb on + strand at 5433.291 kb on - strand at 5433.291 kb on - strand at 5433.293 kb on - strand at 5433.293 kb on - strand at 5433.390 kb on - strand at 5433.390 kb on - strand at 5433.390 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 5,431,373 + PS417_25045 0.29 +0.1 5,431,373 + PS417_25045 0.29 +0.3 5,431,373 + PS417_25045 0.29 +1.3 5,431,373 + PS417_25045 0.29 -0.1 5,431,374 - PS417_25045 0.30 +0.4 5,431,374 - PS417_25045 0.30 -0.5 5,431,374 - PS417_25045 0.30 +0.2 5,431,375 + PS417_25045 0.30 -0.5 5,431,375 + PS417_25045 0.30 -0.7 5,431,470 + PS417_25045 0.62 -0.7 5,431,470 + PS417_25045 0.62 +1.6 5,431,471 - PS417_25045 0.62 +1.4 5,431,471 - PS417_25045 0.62 -0.8 5,431,485 + PS417_25045 0.67 +0.9 5,431,486 - PS417_25045 0.67 -1.4 5,431,486 - PS417_25045 0.67 +0.9 5,431,525 + PS417_25045 0.80 +3.1 5,431,526 - PS417_25045 0.80 -0.1 5,431,526 - PS417_25045 0.80 +0.5 5,431,559 + +0.3 5,431,559 + +0.0 5,431,611 + -1.0 5,431,612 - -0.4 5,431,628 + -0.2 5,431,628 + +0.0 5,431,629 - -0.9 5,431,629 - -0.1 5,431,697 + -2.3 5,431,697 + +0.6 5,431,698 - -2.8 5,431,698 - -0.2 5,431,775 + -2.6 5,431,838 + +0.1 5,431,867 - -2.7 5,431,951 - +0.1 5,431,951 - +0.2 5,431,967 + +0.1 5,431,967 + +0.3 5,431,980 + -1.6 5,431,980 + +0.4 5,432,102 + -0.4 5,432,234 + -0.2 5,432,234 + -0.9 5,432,235 - -0.2 5,432,257 + +0.5 5,432,257 + -1.4 5,432,264 + +2.0 5,432,264 + +0.1 5,432,356 - PS417_25055 0.27 -0.3 5,432,399 + PS417_25055 0.49 -0.9 5,432,400 - PS417_25055 0.49 -1.0 5,432,400 - PS417_25055 0.49 -0.4 5,432,408 + PS417_25055 0.54 -0.8 5,432,408 + PS417_25055 0.54 -0.4 5,432,483 + +0.1 5,432,483 + +0.5 5,432,489 - -0.4 5,432,547 + -0.8 5,432,593 - +1.7 5,432,600 + +0.7 5,432,601 - +0.6 5,432,722 + -0.2 5,432,722 + -0.1 5,432,723 - +0.9 5,432,723 - +1.1 5,432,824 - +0.1 5,432,831 - +1.3 5,432,836 + -0.6 5,432,836 + +0.1 5,432,836 + -2.7 5,432,836 + -0.1 5,432,837 - +0.8 5,432,838 + -0.2 5,432,838 + -0.2 5,432,838 + -1.6 5,432,838 + +1.1 5,432,839 - -0.1 5,432,929 + -1.2 5,433,040 - -0.7 5,433,040 - -0.9 5,433,040 - -0.2 5,433,057 + +0.5 5,433,225 + -0.0 5,433,225 + -0.2 5,433,290 + +0.4 5,433,290 + -0.4 5,433,291 - -0.2 5,433,291 - +0.5 5,433,293 - +1.1 5,433,293 - +0.5 5,433,390 - -1.9 5,433,390 - +0.1 5,433,390 - -0.1
Or see this region's nucleotide sequence