Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22010 and PS417_22015 are separated by 133 nucleotides PS417_22015 and PS417_22020 are separated by 113 nucleotides PS417_22020 and PS417_22025 are separated by 166 nucleotides
PS417_22010: PS417_22010 - MFS transporter, at 4,771,742 to 4,773,154
_22010
PS417_22015: PS417_22015 - hypothetical protein, at 4,773,288 to 4,773,785
_22015
PS417_22020: PS417_22020 - pili assembly chaperone, at 4,773,899 to 4,775,218
_22020
PS417_22025: PS417_22025 - LysR family transcriptional regulator, at 4,775,385 to 4,776,254
_22025
Position (kb)
4773
4774
4775
4776 Strain fitness (log2 ratio)
-1
0
1
2 at 4773.213 kb on + strand at 4773.243 kb on - strand at 4773.524 kb on - strand, within PS417_22015 at 4773.571 kb on - strand, within PS417_22015 at 4774.213 kb on + strand, within PS417_22020 at 4774.214 kb on - strand, within PS417_22020 at 4774.476 kb on + strand, within PS417_22020 at 4774.476 kb on + strand, within PS417_22020 at 4774.477 kb on - strand, within PS417_22020 at 4774.477 kb on - strand, within PS417_22020 at 4774.510 kb on - strand, within PS417_22020 at 4774.510 kb on - strand, within PS417_22020 at 4774.609 kb on - strand, within PS417_22020 at 4774.609 kb on - strand, within PS417_22020 at 4774.680 kb on + strand, within PS417_22020 at 4774.875 kb on + strand, within PS417_22020 at 4774.875 kb on + strand, within PS417_22020 at 4774.875 kb on + strand, within PS417_22020 at 4774.876 kb on - strand, within PS417_22020 at 4774.876 kb on - strand, within PS417_22020 at 4774.992 kb on + strand, within PS417_22020 at 4775.320 kb on + strand at 4775.320 kb on + strand at 4775.320 kb on + strand at 4775.320 kb on + strand at 4775.320 kb on + strand at 4775.321 kb on - strand at 4775.322 kb on + strand at 4775.323 kb on - strand at 4775.356 kb on + strand at 4775.673 kb on + strand, within PS417_22025 at 4775.883 kb on - strand, within PS417_22025 at 4776.014 kb on + strand, within PS417_22025
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 4,773,213 + +2.1 4,773,243 - -0.2 4,773,524 - PS417_22015 0.47 +1.2 4,773,571 - PS417_22015 0.57 -0.1 4,774,213 + PS417_22020 0.24 +0.3 4,774,214 - PS417_22020 0.24 +2.1 4,774,476 + PS417_22020 0.44 +0.4 4,774,476 + PS417_22020 0.44 +0.9 4,774,477 - PS417_22020 0.44 +0.5 4,774,477 - PS417_22020 0.44 +1.3 4,774,510 - PS417_22020 0.46 -0.2 4,774,510 - PS417_22020 0.46 +0.6 4,774,609 - PS417_22020 0.54 +0.1 4,774,609 - PS417_22020 0.54 -0.5 4,774,680 + PS417_22020 0.59 +1.1 4,774,875 + PS417_22020 0.74 +0.3 4,774,875 + PS417_22020 0.74 +0.2 4,774,875 + PS417_22020 0.74 +0.4 4,774,876 - PS417_22020 0.74 -0.5 4,774,876 - PS417_22020 0.74 -1.0 4,774,992 + PS417_22020 0.83 +2.0 4,775,320 + -0.4 4,775,320 + +0.0 4,775,320 + -0.1 4,775,320 + -0.2 4,775,320 + +1.5 4,775,321 - -0.7 4,775,322 + -0.7 4,775,323 - +0.6 4,775,356 + -0.7 4,775,673 + PS417_22025 0.33 +0.4 4,775,883 - PS417_22025 0.57 +2.1 4,776,014 + PS417_22025 0.72 +0.1
Or see this region's nucleotide sequence