Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_14565 and PS417_14575 are separated by 437 nucleotides PS417_14575 and PS417_14580 overlap by 4 nucleotides
PS417_14565: PS417_14565 - chemotaxis protein, at 3,184,740 to 3,186,233
_14565
PS417_14575: PS417_14575 - MFS transporter, at 3,186,671 to 3,188,008
_14575
PS417_14580: PS417_14580 - saccharopine dehydrogenase, at 3,188,005 to 3,189,135
_14580
Position (kb)
3186
3187
3188
3189 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3186.334 kb on - strand at 3186.419 kb on + strand at 3186.419 kb on + strand at 3186.420 kb on - strand at 3186.487 kb on - strand at 3186.497 kb on + strand at 3186.498 kb on - strand at 3186.506 kb on - strand at 3186.979 kb on - strand, within PS417_14575 at 3186.982 kb on - strand, within PS417_14575 at 3187.134 kb on - strand, within PS417_14575 at 3187.134 kb on - strand at 3187.193 kb on + strand, within PS417_14575 at 3187.442 kb on + strand, within PS417_14575 at 3187.442 kb on + strand, within PS417_14575 at 3187.443 kb on - strand, within PS417_14575 at 3187.443 kb on - strand, within PS417_14575 at 3187.443 kb on - strand, within PS417_14575 at 3187.444 kb on + strand, within PS417_14575 at 3187.469 kb on + strand, within PS417_14575 at 3187.470 kb on - strand, within PS417_14575 at 3187.568 kb on + strand at 3187.569 kb on - strand, within PS417_14575 at 3187.569 kb on - strand at 3187.569 kb on - strand, within PS417_14575 at 3187.807 kb on + strand, within PS417_14575 at 3187.807 kb on + strand, within PS417_14575 at 3187.807 kb on + strand, within PS417_14575 at 3187.808 kb on - strand, within PS417_14575 at 3188.007 kb on - strand at 3188.075 kb on + strand at 3188.076 kb on - strand at 3188.076 kb on - strand at 3188.076 kb on - strand at 3188.076 kb on - strand at 3188.129 kb on + strand, within PS417_14580 at 3188.264 kb on + strand, within PS417_14580 at 3188.264 kb on + strand, within PS417_14580 at 3188.264 kb on + strand, within PS417_14580 at 3188.265 kb on - strand, within PS417_14580 at 3188.555 kb on - strand, within PS417_14580 at 3188.865 kb on - strand, within PS417_14580
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 3,186,334 - -0.7 3,186,419 + -0.3 3,186,419 + +2.0 3,186,420 - +0.1 3,186,487 - +1.0 3,186,497 + +2.0 3,186,498 - +0.4 3,186,506 - +0.3 3,186,979 - PS417_14575 0.23 +0.1 3,186,982 - PS417_14575 0.23 +2.2 3,187,134 - PS417_14575 0.35 +0.5 3,187,134 - +2.0 3,187,193 + PS417_14575 0.39 +0.1 3,187,442 + PS417_14575 0.58 +2.1 3,187,442 + PS417_14575 0.58 +0.5 3,187,443 - PS417_14575 0.58 -0.4 3,187,443 - PS417_14575 0.58 -0.3 3,187,443 - PS417_14575 0.58 +0.6 3,187,444 + PS417_14575 0.58 -0.8 3,187,469 + PS417_14575 0.60 +0.6 3,187,470 - PS417_14575 0.60 +0.3 3,187,568 + +1.0 3,187,569 - PS417_14575 0.67 +2.8 3,187,569 - +0.4 3,187,569 - PS417_14575 0.67 +0.3 3,187,807 + PS417_14575 0.85 +1.4 3,187,807 + PS417_14575 0.85 +0.0 3,187,807 + PS417_14575 0.85 +0.7 3,187,808 - PS417_14575 0.85 +0.7 3,188,007 - -0.9 3,188,075 + +0.0 3,188,076 - +1.5 3,188,076 - -0.6 3,188,076 - +1.5 3,188,076 - +2.0 3,188,129 + PS417_14580 0.11 +0.2 3,188,264 + PS417_14580 0.23 +0.7 3,188,264 + PS417_14580 0.23 -1.3 3,188,264 + PS417_14580 0.23 -0.1 3,188,265 - PS417_14580 0.23 -0.2 3,188,555 - PS417_14580 0.49 +0.4 3,188,865 - PS417_14580 0.76 +0.1
Or see this region's nucleotide sequence