Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13965 and PS417_13970 overlap by 4 nucleotides PS417_13970 and PS417_13975 are separated by 91 nucleotides
PS417_13965: PS417_13965 - acetoin utilization protein, at 3,067,775 to 3,068,887
_13965
PS417_13970: PS417_13970 - glycerate kinase, at 3,068,884 to 3,070,026
_13970
PS417_13975: PS417_13975 - CdaR family transcriptional regulator, at 3,070,118 to 3,071,224
_13975
Position (kb)
3068
3069
3070
3071 Strain fitness (log2 ratio)
-1
0
1 at 3068.021 kb on + strand, within PS417_13965 at 3068.021 kb on + strand, within PS417_13965 at 3068.022 kb on - strand, within PS417_13965 at 3068.723 kb on + strand, within PS417_13965 at 3068.723 kb on + strand, within PS417_13965 at 3068.728 kb on - strand, within PS417_13965 at 3068.920 kb on + strand at 3069.026 kb on + strand, within PS417_13970 at 3069.026 kb on + strand, within PS417_13970 at 3069.026 kb on + strand, within PS417_13970 at 3069.026 kb on + strand, within PS417_13970 at 3069.026 kb on + strand, within PS417_13970 at 3069.026 kb on + strand, within PS417_13970 at 3069.027 kb on - strand, within PS417_13970 at 3069.027 kb on - strand, within PS417_13970 at 3069.027 kb on - strand, within PS417_13970 at 3069.027 kb on - strand, within PS417_13970 at 3069.200 kb on - strand, within PS417_13970 at 3069.693 kb on - strand, within PS417_13970 at 3069.731 kb on - strand, within PS417_13970 at 3070.099 kb on + strand at 3070.099 kb on + strand at 3070.158 kb on + strand at 3070.223 kb on - strand at 3070.467 kb on + strand, within PS417_13975 at 3070.687 kb on + strand, within PS417_13975 at 3070.687 kb on + strand, within PS417_13975 at 3070.731 kb on + strand, within PS417_13975 at 3070.731 kb on + strand, within PS417_13975
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 3,068,021 + PS417_13965 0.22 +1.4 3,068,021 + PS417_13965 0.22 -0.2 3,068,022 - PS417_13965 0.22 -1.3 3,068,723 + PS417_13965 0.85 -0.8 3,068,723 + PS417_13965 0.85 +0.4 3,068,728 - PS417_13965 0.86 -0.1 3,068,920 + -0.4 3,069,026 + PS417_13970 0.12 +0.1 3,069,026 + PS417_13970 0.12 -0.2 3,069,026 + PS417_13970 0.12 -0.5 3,069,026 + PS417_13970 0.12 -0.6 3,069,026 + PS417_13970 0.12 +0.3 3,069,026 + PS417_13970 0.12 -0.4 3,069,027 - PS417_13970 0.13 -0.4 3,069,027 - PS417_13970 0.13 +0.8 3,069,027 - PS417_13970 0.13 +0.8 3,069,027 - PS417_13970 0.13 -0.2 3,069,200 - PS417_13970 0.28 -0.3 3,069,693 - PS417_13970 0.71 +1.3 3,069,731 - PS417_13970 0.74 -1.7 3,070,099 + -0.7 3,070,099 + -0.3 3,070,158 + -0.3 3,070,223 - -0.7 3,070,467 + PS417_13975 0.32 -0.0 3,070,687 + PS417_13975 0.51 +0.7 3,070,687 + PS417_13975 0.51 -0.3 3,070,731 + PS417_13975 0.55 -0.3 3,070,731 + PS417_13975 0.55 +0.1
Or see this region's nucleotide sequence