Strain Fitness in Pseudomonas simiae WCS417 around PS417_13915

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
3,057,757	-				+1.0
3,057,757	-				-1.7
3,057,757	-				+0.1
3,057,757	-				+0.1
3,057,967	-				+0.0
3,058,036	+				-0.5
3,058,037	-				-0.2
3,058,037	-				-0.3
3,058,048	+				+0.2
3,058,083	+				+0.0
3,058,114	+				+0.1
3,058,114	+				-2.0
3,058,114	+				+3.0
3,058,114	+				-1.1
3,058,114	+				-0.2
3,058,114	+				-0.4
3,058,115	-				-1.6
3,058,115	-				+1.7
3,058,115	-				+2.0
3,058,266	+				+0.7
3,058,470	-				-0.1
3,058,534	+				-0.4
3,058,558	+				-0.4
3,058,599	-				+0.5
3,058,599	-				-0.4
3,058,627	+				+0.0
3,058,628	-				+0.6
3,058,628	-				+0.0
3,058,751	+				+1.7
3,058,751	+				+0.0
3,058,751	+				+0.6
3,058,755	+				-0.1
3,058,755	+				+0.4
3,058,755	+				-0.2
3,058,755	+				-2.2
3,058,755	+				+0.3
3,058,755	+				-1.6
3,058,756	-				-0.9
3,058,756	-				+0.5
3,058,756	-				-0.3
3,058,756	-				+0.3
3,058,757	+				-0.4
3,058,758	-				-0.6
3,058,793	+		PS417_13915	0.11	+0.2
3,058,916	+		PS417_13915	0.20	-0.9
3,059,015	+		PS417_13915	0.27	-0.5
3,059,072	+		PS417_13915	0.31	+0.4
3,059,073	-		PS417_13915	0.31	+1.6
3,059,132	+		PS417_13915	0.36	+0.5
3,059,132	+		PS417_13915	0.36	-0.7
3,059,153	+		PS417_13915	0.37	-0.7
3,059,153	+		PS417_13915	0.37	+0.1
3,059,154	-		PS417_13915	0.37	-3.2
3,059,223	-		PS417_13915	0.42	+0.2
3,059,223	-		PS417_13915	0.42	-1.1
3,059,279	-				-0.6
3,059,544	+		PS417_13915	0.65	-0.5
3,059,591	+		PS417_13915	0.68	-0.3
3,059,592	-		PS417_13915	0.68	-1.7
3,059,655	-		PS417_13915	0.73	-0.6
3,059,663	+		PS417_13915	0.73	-0.4
3,059,664	-		PS417_13915	0.74	-0.8
3,059,711	+				+2.3
3,059,712	-		PS417_13915	0.77	+0.2
3,059,712	-		PS417_13915	0.77	-3.1
3,059,775	-		PS417_13915	0.81	-1.2
3,059,775	-		PS417_13915	0.81	-0.2
3,059,951	+				-0.3
3,059,952	-				+1.7
3,059,959	-				+3.3
3,059,969	+				-0.7
3,060,343	+		PS417_13920	0.39	-0.2
3,060,394	-		PS417_13920	0.46	+0.0
3,060,397	-		PS417_13920	0.47	+0.8
3,060,551	+		PS417_13920	0.69	+1.0
3,060,551	+		PS417_13920	0.69	+0.5
3,060,553	+				-0.4
3,060,553	+		PS417_13920	0.70	+2.3
3,060,553	+		PS417_13920	0.70	+0.0
3,060,554	-		PS417_13920	0.70	+0.0
3,060,554	-		PS417_13920	0.70	+0.0
3,060,554	-		PS417_13920	0.70	-0.2
3,060,563	+		PS417_13920	0.71	-0.4
3,060,563	+				-0.4
3,060,573	+		PS417_13920	0.73	+2.0
3,060,574	-		PS417_13920	0.73	-0.6
3,060,646	+		PS417_13920	0.84	+1.0
3,060,647	-		PS417_13920	0.84	+0.1
3,060,647	-		PS417_13920	0.84	+0.2
3,060,748	-				-0.2
3,060,796	+				-2.2
3,060,796	+				+0.5
3,060,796	+				+0.3
3,060,796	+				+0.3
3,060,796	+				-0.2
3,060,797	-				-1.0
3,060,797	-				-1.6
3,060,802	+				+1.3
3,060,803	-				+0.3
3,060,803	-				-0.8
3,060,803	-				+0.0
3,060,806	+				-0.5
3,060,807	-				+0.5
3,060,807	-				-1.9
3,060,807	-				+0.0
3,060,807	-				-0.8